Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0159 |
Symbol | rfaD |
ID | 6988868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 198490 |
End bp | 199431 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643378547 |
Product | ADP-L-glycero-D-mannoheptose-6-epimerase |
Protein accession | YP_002261705 |
Protein GI | 209693777 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCATTG TAACTGGCGG CGCTGGCATG ATTGGCAGCA ACATTATTAA GTCTTTAAAT GACAACGGCT TTAACGATAT CTTAGTGGTT GATAACCTGA AAGATGGCAA AAAATTCAAG AACCTAGTTG ATCTTGATAT CACTGATTAC ATGGATAAAG AAGATTTCAT TACGCAAATC ATGGCGGGTG ATGACTTTGG TACAATTGAT GCTATTTTCC ACGAAGGTGC GTGCTCTGCT ACCACTGAGT GGGATGGCAA ATACATGATG ATGAACAACT ATGAATACTC GAAAGAAGTG CTTCATTTTT GTATCGAACG TGAGATCCCA TTCTTATACG CATCATCTGC TGCGACTTAT GGCGATACTG ATACCTTCAT TGAAGAGCGT GAGTACGAAG GTGCATTAAA CGTTTACGGC TATTCTAAAC AACAGTTTGA TAACTACGTT CGCCGCCTAT GGGCTGATGC TGAAGCGCAC GGTGAAACGG TTTCTCAAAT TACCGGTTTC CGTTACTTCA ATGTCTATGG TCCTCGTGAG CAACATAAAG GTTCTATGGC TTCGGTTGCT TTCCATCTGA ACAATCAAAT GAATGCCAGC GAAGATCCTA AACTGTTTGA GCGCAGTGAT GAATTCAAGC GTGATTTCGT TTACGTGGGT GATGTGGCTG CGGTTAACTT GTGGTTCTTA GAAAATGGCG TATCAGGTAT TTTCAACTGT GGTACTGGTC GTGCTGAACC GTTCCGCGCT GTTGCGGATG CGGTAATTAA GCACCACGGT AAAGGCGAAG TTCAAAGCAT TCCGTTCCCT GAGCATTTAA AAGGCGCATA TCAAGAGTTT ACGCAAGCAG ATTTAACTAA GTTGCGAGCT GCGGGTTGTG ATGTTGAGTT TAAGTCGGTA GCTGATGGTG TTGCTGAGTA TATGGCGATT GTTAATAAGT AA
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Protein sequence | MIIVTGGAGM IGSNIIKSLN DNGFNDILVV DNLKDGKKFK NLVDLDITDY MDKEDFITQI MAGDDFGTID AIFHEGACSA TTEWDGKYMM MNNYEYSKEV LHFCIEREIP FLYASSAATY GDTDTFIEER EYEGALNVYG YSKQQFDNYV RRLWADAEAH GETVSQITGF RYFNVYGPRE QHKGSMASVA FHLNNQMNAS EDPKLFERSD EFKRDFVYVG DVAAVNLWFL ENGVSGIFNC GTGRAEPFRA VADAVIKHHG KGEVQSIPFP EHLKGAYQEF TQADLTKLRA AGCDVEFKSV ADGVAEYMAI VNK
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