Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0147 |
Symbol | trxA |
ID | 6989092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 186733 |
End bp | 187059 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643378538 |
Product | thioredoxin 1 |
Protein accession | YP_002261696 |
Protein GI | 209693768 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000169587 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGACA AAATTTTGCA GCTTACAGAT GACGGTTTTG AAGAAAGTGT TATCAATGCT TCAGGCCCAG TACTAGTAGA TTTCTGGGCA GAATGGTGTG GTCCTTGTAA AATGATTGCT CCCATTCTGG ATGAGATTGC AGATGAGTAC GAAGGCAAAT TAACGATTGG TAAATTAAAT ATCGATCAGA ATGCAGGAAC ACCGCCAAAA TTCGGTATCC GTGGCATTCC AACGCTGCTT TTATTTAAAG ATGGTGGCGT AGCTGCAACG AAAGTGGGTG CACTTTCTAA AACTCAACTT AAAGAGTTTC TTGATGCAAA CCTATAA
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Protein sequence | MSDKILQLTD DGFEESVINA SGPVLVDFWA EWCGPCKMIA PILDEIADEY EGKLTIGKLN IDQNAGTPPK FGIRGIPTLL LFKDGGVAAT KVGALSKTQL KEFLDANL
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