| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0146 |
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| Symbol | rhlB |
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| ID | 6988619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 185316 |
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| End bp | 186620 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643378537 |
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| Product | ATP-dependent RNA helicase RhlB |
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| Protein accession | YP_002261695 |
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| Protein GI | 209693767 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00149472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA CGCACATCAC AGAGCAAAAA TTTGCCGACC TAGGTTTAGA GCCTCAGGTC
CTTGATGGTT TGAATGCAAA AGGGTTCATT AATTGTACCC CAATTCAAGC CAAGGCATTG
CCGGTACTGC TCGCCGGCCA AGACATTGCA GGCCAAGCCC AAACGGGCAC TGGTAAGACG
CTCGCGTTCC TTGCTGCTAC TTTTAATCAC CTATTAACTA CGCCTGCACC TGAAGGCCGT
AAAATCACGC AACCACGAGC TATTATTATG GCTCCAACGC GTGAGTTAGC GATTCAAATC
TATAACGATG CTGAATCTCT AATCGCAAGT ACCGGCTTAA AAGCGGCACT TGCTTACGGT
GGCGAACGCT ATGAGAAGCA ACAAAAAGTT ATCGAAGCTG GTGTTGATAT CCTAATCGGA
ACAACTGGCC GCATTATCGA TTTCTACAAA CAAGGTCAAA TTGACTTTAA AGCAATCCAA
GTGGTTGTTT TAGATGAAGC CGATCGCATG TTTGATTTGG GTTTCATTAA AGATATTCGT
TTTGTATTCC GTCGTATGCC AGCGCCTGCT GAGCGTCTGA ATATGCTGTT TTCAGCAACA
TTATCTTACC GCGTACAAGA ACTTGCGTTT GAACACATGC AAGAACCTGA GCACGTAGTT
GTTGAACCGG ATCAAAAAAC GGGTCACCTG ATTACTGAAG AATTATTCTA TCCTTCAAAT
GATCACAAAA TGGCACTTCT TCAAACATTG ATCGAAGAAG AATGGCCTGA TCGTGCAATT
ATTTTCGCCA ATACTAAACA CAAATGTGAA TTAGTTTGGG GGCATCTAGC TGCCGATAAA
CACCGCGTAG GCCTTCTTAC TGGTGATGTT CCACAGAAAA AACGTGAACG CATCCTAGAA
GAATTTACGA AAGGTGAAGT CGATATCCTT GTTGCTACCG ACGTAGCGGC TCGTGGTCTA
CACATTCCAC AAGTAACACA TGTATTTAAT TTTGATTTAC CAAATGAAGC CGAAGATTAT
GTTCACCGTA TTGGTCGTAC TGGTCGTGCT GGTGAAAGCG GTAATTCAAT TAGTTTCGCT
TGTGAAGAAT ACGCAATCAA TCTTCCTGCA ATTGAAGAAT ACATTGAGCA TTCAATTCCA
CAGTCTGATT ACGATACATC AGCACTATTG GAAGATTTAC CAGCACCAAT CAGACTTCAA
CGCCGTCCAC CACAAAATCG TCGTAACGGC AGTAACAATG GTCAACGTCA AAGCGGGAAT
CGCAAACATT CACGCCCACG TCCACCTCGT AGCCCTCAAG CTTAA
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| Protein sequence | MKKTHITEQK FADLGLEPQV LDGLNAKGFI NCTPIQAKAL PVLLAGQDIA GQAQTGTGKT
LAFLAATFNH LLTTPAPEGR KITQPRAIIM APTRELAIQI YNDAESLIAS TGLKAALAYG
GERYEKQQKV IEAGVDILIG TTGRIIDFYK QGQIDFKAIQ VVVLDEADRM FDLGFIKDIR
FVFRRMPAPA ERLNMLFSAT LSYRVQELAF EHMQEPEHVV VEPDQKTGHL ITEELFYPSN
DHKMALLQTL IEEEWPDRAI IFANTKHKCE LVWGHLAADK HRVGLLTGDV PQKKRERILE
EFTKGEVDIL VATDVAARGL HIPQVTHVFN FDLPNEAEDY VHRIGRTGRA GESGNSISFA
CEEYAINLPA IEEYIEHSIP QSDYDTSALL EDLPAPIRLQ RRPPQNRRNG SNNGQRQSGN
RKHSRPRPPR SPQA
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