Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0139 |
Symbol | fepD |
ID | 6986344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 178517 |
End bp | 179617 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643378531 |
Product | iron-siderophore ABC transporter, membrane permease component |
Protein accession | YP_002261689 |
Protein GI | 209693761 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAACG CAGATAACCA ATTAACTAGT ACACCTGACT TGGCTATTCT CCCTTCTTTA ATCAGCAGAA ATAAAAAGGT CACTACCACA TTAATATTGC TAATTATATT AAGTTTTTCT GCAATTATTT CTGGGCTTCT TTTAGGAACA ACAACCCTAT CTCCCTTTTA TCTACTGCGC TTATTTAGTG AAAATAATCT CAATCACGAT ACTCTTATTA TACAAGCTCG ACTCCCACGA GTTCTGATTG GTTTATTGGC TGGAATGTCA TTAGCAATGG CAGGCTGCGT CATGCAAGCC TTAACTCGAA ACCCTTTAGC TGATCCGGGT TTACTCGGTG TAAATGCGGG AGCGAATGCC TCAATAATAA CACTCAGCTT ATTATCATTC AGTGCCAACT GGCCTCTTTT TTGGTTAGCG ATTCCTGGTG CGTTACTCAC GAGCGTGATG GTCTACTTAT TGTCACGAGG CCACAATCAA TCCCCAACAA GGCTTATCCT ATCTGGTGCC GCCATTAGTG CCGTATTAGG TGCTTATGTG CAAGCAAGAG TCATCGTAAA CCCATCGCTT TTTAGTGACC TAAAGTATTG GATGTCGGGG TCATTATCAG GACTCCAACT ATCTGATATT AATACGATAT GGCCTTACTT TATTATCGCT ACTGTCATTC TTCTTCTATT AGCTCCTGCT TTAAATTTAC TCTCTATCGA TAGAAACATT GCGATATCCT TGGGGGCGAA TTTACGATGG CAGCCGCAAC TAGGTTGGCT TGGCGCTACG ATTTTGTGTG CGGCCTCAAC CGCCACCGTC GGGTCACTGA CTTTTGTTGG TTTAGCATCC GCCCACCTTT CTCGATTTAT TGCCCCACAG GATTTTCGCT GGCAATTGCC CATATCGGCA CTCATTGGCG GTAACCTTGT TGTTATTGCT GATGTGATCG CCCGAACACT CATGCCTCCG ACAGAGCTTA TTACTGGCAT CGTTGTCGCT ATGCTCGGCG CTCCTTTTCT CTACCTCGCA GTGAGAAGAG ATCAAATGAA AAAGTCGTCA TCAGTAACAC CTTGTAAACG ACGTCTGAAG AGAAACTCAA ATGAAAACTA A
|
Protein sequence | MNNADNQLTS TPDLAILPSL ISRNKKVTTT LILLIILSFS AIISGLLLGT TTLSPFYLLR LFSENNLNHD TLIIQARLPR VLIGLLAGMS LAMAGCVMQA LTRNPLADPG LLGVNAGANA SIITLSLLSF SANWPLFWLA IPGALLTSVM VYLLSRGHNQ SPTRLILSGA AISAVLGAYV QARVIVNPSL FSDLKYWMSG SLSGLQLSDI NTIWPYFIIA TVILLLLAPA LNLLSIDRNI AISLGANLRW QPQLGWLGAT ILCAASTATV GSLTFVGLAS AHLSRFIAPQ DFRWQLPISA LIGGNLVVIA DVIARTLMPP TELITGIVVA MLGAPFLYLA VRRDQMKKSS SVTPCKRRLK RNSNEN
|
| |