Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0127 |
Symbol | |
ID | 6988392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 163276 |
End bp | 163977 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643378520 |
Product | hypothetical protein |
Protein accession | YP_002261678 |
Protein GI | 209693750 |
COG category | [S] Function unknown |
COG ID | [COG3159] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGAAG TAACACCAAT AGAGCCACAG CCGACTCAAT TAACGGAAGA CGTTGTGGCT CAATTTTTAA TGGATCACCC TGATTTTTTT CAACAGCATC CCGAGCTTCT TGGGCGAATT AAAGTCGATA CTCCTGAGCG AGGCGTGGTT TCTTTAGTTG AAGTACAAGT CAGTAAGCTA CGTAATCGTA TTGGTGATTT AGAAGAAGAA ATTACTCAGT TAATGTCACT CGCGGCAAAA AATGATCGCT TATTTCATGA CTTTGCTGAT GTTCAAAAAC AATTATTGAT GTGTGAGTCA TTTGATCAAG CCGCTAAAAT TATAGAGCAG AAAGCCGTCG TGCTGAATTT AACGGCTTAT ATAAAAATAA TTGATCATGC TCATCCTAAA TATAATGTAG ATAAAACAGC CCTCGATAAT TTCATGAAAA AATTCTTGAA TGGTCGTTCT GCATACTTAG GGCGCTTGCG TCAAACTGAG CGTGATAGCT TATTGGCCTA TGGTGGGCTA AATACCTCAA GTTCAGAATT GGGGTCATTC TCTGTTTTAC CATTAGGACA GTCAACCCCT ATGGGGATCA TGGCTTTTGC TAGCCGTGAT GGTGGCCATT TTCAACCGAA TATGGATACG TTATTTTTGG AACAACTTGT GAGTGTGTTC CATTACTTAC TAACTCAGTG GTCTAAAGCA CATAATGAGT GA
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Protein sequence | MNEVTPIEPQ PTQLTEDVVA QFLMDHPDFF QQHPELLGRI KVDTPERGVV SLVEVQVSKL RNRIGDLEEE ITQLMSLAAK NDRLFHDFAD VQKQLLMCES FDQAAKIIEQ KAVVLNLTAY IKIIDHAHPK YNVDKTALDN FMKKFLNGRS AYLGRLRQTE RDSLLAYGGL NTSSSELGSF SVLPLGQSTP MGIMAFASRD GGHFQPNMDT LFLEQLVSVF HYLLTQWSKA HNE
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