Gene VSAL_I0127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0127 
Symbol 
ID6988392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp163276 
End bp163977 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content39% 
IMG OID643378520 
Producthypothetical protein 
Protein accessionYP_002261678 
Protein GI209693750 
COG category[S] Function unknown 
COG ID[COG3159] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAAG TAACACCAAT AGAGCCACAG CCGACTCAAT TAACGGAAGA CGTTGTGGCT 
CAATTTTTAA TGGATCACCC TGATTTTTTT CAACAGCATC CCGAGCTTCT TGGGCGAATT
AAAGTCGATA CTCCTGAGCG AGGCGTGGTT TCTTTAGTTG AAGTACAAGT CAGTAAGCTA
CGTAATCGTA TTGGTGATTT AGAAGAAGAA ATTACTCAGT TAATGTCACT CGCGGCAAAA
AATGATCGCT TATTTCATGA CTTTGCTGAT GTTCAAAAAC AATTATTGAT GTGTGAGTCA
TTTGATCAAG CCGCTAAAAT TATAGAGCAG AAAGCCGTCG TGCTGAATTT AACGGCTTAT
ATAAAAATAA TTGATCATGC TCATCCTAAA TATAATGTAG ATAAAACAGC CCTCGATAAT
TTCATGAAAA AATTCTTGAA TGGTCGTTCT GCATACTTAG GGCGCTTGCG TCAAACTGAG
CGTGATAGCT TATTGGCCTA TGGTGGGCTA AATACCTCAA GTTCAGAATT GGGGTCATTC
TCTGTTTTAC CATTAGGACA GTCAACCCCT ATGGGGATCA TGGCTTTTGC TAGCCGTGAT
GGTGGCCATT TTCAACCGAA TATGGATACG TTATTTTTGG AACAACTTGT GAGTGTGTTC
CATTACTTAC TAACTCAGTG GTCTAAAGCA CATAATGAGT GA
 
Protein sequence
MNEVTPIEPQ PTQLTEDVVA QFLMDHPDFF QQHPELLGRI KVDTPERGVV SLVEVQVSKL 
RNRIGDLEEE ITQLMSLAAK NDRLFHDFAD VQKQLLMCES FDQAAKIIEQ KAVVLNLTAY
IKIIDHAHPK YNVDKTALDN FMKKFLNGRS AYLGRLRQTE RDSLLAYGGL NTSSSELGSF
SVLPLGQSTP MGIMAFASRD GGHFQPNMDT LFLEQLVSVF HYLLTQWSKA HNE