Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0090 |
Symbol | |
ID | 6986304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 120838 |
End bp | 121944 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643378479 |
Product | putative multidrug transporter, HlyD family |
Protein accession | YP_002261642 |
Protein GI | 209693714 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGT GGACTTTCTT TATGTTGCTT CTTGCACTAC TTATTTTTGG TAGTGTTATT GGCTTTAACA TGTTTAAACA GCAAAAAATT GCTGAATTTA TGGCAAACCG CCCTGAACCT GAATTTCCTG TCACGATAGA AACAGTCAAA GCGTCAACCT GGACTCCAAC TATCGAGGCG ATTGGTTTTA TTGAACCAAA CCAAGGTGTA ACACTAACCA CTGAATCAAA CGGTGTGATC GATAAAATTT CATTTGATTC TGGTAGCCAA GTAAAAGATG ACCAATTGCT TATTTCTCTT GATTCTAAAG TAGAAAAAGC AAACTTAAGA AGCTCTCAAG CACGCCTACC TGCTGCTGAA GCAAAATATA AACGCTATAA AGGTTTATTT AAAAAAGGGT CTATCTCTAA AGAAGCTTAC GATGAAGCAG AAGCAAATTT CTTCTCTCTT GCTGCTGATA TTGAAGGCCT AAAAGCGACT ATTGAGCGTC GTGAAATCAA AGCACCATTT GCTGGTGTCA TTGGTATCCG TAATGTTTAT CTTGGTCAAT ACTTACAACC AGGTACTGAT ATTGTCCGTC TAGAAGACAC TAGCATTATG CGTTTACGCT TTACGGTGCC TCAAACTGAT ATTTCTCGCA TTAATATCGG ACAAGACATC GATATATACA TCGACTCTTA TCCAACTGAG ACTTTCAAAG GGTCGATCAG TGCAATTGAA CCAGCGGTAA ATATTCAAAG TGGGTTAATT CAGGTTCAAG CTGATATTCC AAATAATGGT GGTAAGCTAC GTAGTGGTAT GTTTGCTCGC GCTGAAATCA TTCTCCCAGC ATTTGAAAAC CAAGTGGTTA TTCCTCAAAC CTCAATTACA TTCACGCTAT ATGGTGACAA TGTCTACATC GTTTCTGATG TTGACGGTGT TAAACGTGTT AAACAAGCGG TTGTAAAAGT AGGTGAACGA ACTAAAGCTG TTGCTCATAT TCTTGATGGT GTTAAACCTG GAGATATGGT CGTGACATCA GGACAAGTTC GTCTAAGTAA CGATGCAAAA GTGCGTGTTG TCGAAAGTGA CGCAACAACG CCGCCTGCTG AAACACCAAT GTTGTAA
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Protein sequence | MKKWTFFMLL LALLIFGSVI GFNMFKQQKI AEFMANRPEP EFPVTIETVK ASTWTPTIEA IGFIEPNQGV TLTTESNGVI DKISFDSGSQ VKDDQLLISL DSKVEKANLR SSQARLPAAE AKYKRYKGLF KKGSISKEAY DEAEANFFSL AADIEGLKAT IERREIKAPF AGVIGIRNVY LGQYLQPGTD IVRLEDTSIM RLRFTVPQTD ISRINIGQDI DIYIDSYPTE TFKGSISAIE PAVNIQSGLI QVQADIPNNG GKLRSGMFAR AEIILPAFEN QVVIPQTSIT FTLYGDNVYI VSDVDGVKRV KQAVVKVGER TKAVAHILDG VKPGDMVVTS GQVRLSNDAK VRVVESDATT PPAETPML
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