| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0081 |
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| Symbol | purE |
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| ID | 6989040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 83673 |
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| End bp | 84209 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643378444 |
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| Product | phosphoribosylaminoimidazole carboxylase catalytic subunit |
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| Protein accession | YP_002261633 |
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| Protein GI | 209693705 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
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| TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.433524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGCCAA CTTTTTATAT ATTGCCATTA TCTTTATCCA AGGAGTTCAC AATGAAAGTC
GGTATTATCA TGGGTTCGAA ATCAGATTGG CCAACAATGA AACTAGCCGC TGAAATGCTT
GAGCGTTTTA ATGTTCCTTA CGAAACCAAA GTGGTCTCTG CTCATAGAAC TCCACAATTA
CTTGCTGATT ATGCAACTCA AGCAAAAGAT CGCGGTATCA AAGTTATTAT TGCAGGTGCT
GGTGGTGCCG CTCACCTCCC AGGCATGGCA GCTGCATTTA CGAGTATTCC TGTTTTAGGC
GTCCCTGTTC AATCAAAAGT ATTAAAAGGG ATAGACTCTC TACTTTCTAT CGTTCAAATG
CCAAAGGGGA TCGCTGTAGG TACACTCGCG ATAGGTGAGG CTGGCGCTGC AAATGCAGGT
ATCCTCGCAG CTCAAATCAT TGGTACGTCA AATGAAGCAG TAATGGCAGC AGTAGAAGCC
TTCCGTAAAG AACAAACAGA TACTGTCTTA GCAAATCCAG ATCCATCAGA GGATTAA
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| Protein sequence | MLPTFYILPL SLSKEFTMKV GIIMGSKSDW PTMKLAAEML ERFNVPYETK VVSAHRTPQL
LADYATQAKD RGIKVIIAGA GGAAHLPGMA AAFTSIPVLG VPVQSKVLKG IDSLLSIVQM
PKGIAVGTLA IGEAGAANAG ILAAQIIGTS NEAVMAAVEA FRKEQTDTVL ANPDPSED
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