Gene VSAL_I0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0043 
Symbol 
ID6986277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp46481 
End bp47350 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content38% 
IMG OID643378412 
Productputative acyltransferase 
Protein accessionYP_002261601 
Protein GI209693673 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTT TTATGTTTGC TAATATTCGA CTCGTCATTA GTACTTTGCT TGTAATCCTA 
AATACGGCTC TGACGTCATT TATTATCAGC TTTTTTGCTG TAATTAAATT TATTCTGCCT
TTTCCTTTCG TAAAGAAATT AATGGTATCA ATGGCGAATA AGACCTTATG GTGTTGGGCT
ACGTTGAATT TATGGATGCT CAATATTAAC AATACAATTG ATTGGGTTGT TGATGGGGGG
GAAACGCTAT CTCAAGAAAA GTGGTATTTA TTGTTATCTA ACCACGTAAG TTGGGCTGAT
ATCGTTATTT TATCCTCCGT GATGAAAGAT AAAGTGCCAA TGACTAAGTT CTTTTTGAAA
TATGAACTGC TCTATGTTCC CTTTGTCGGG CTTGCATGTT GGGGGGCGGA CATGCCCTTT
ATGCGCCGAA ACCCTGAACG CAAAGACGAT GACTTTAAAG CGATTCAAAA GTCGTGTGAA
AACTTTCGCT CAGTGCCGAC TACGGTGGTT AATTTTGTTG AAGGAACACG AGCGACGCCT
GATAAATTAA AAGAAGCGCG TACGCCTTAT CAACATTTGT TCAAGCCAAA GATTGGTGGT
GTGGCATTTA CGTTATCAGC GATGGGTGAA CTGTTTGATG GAATCGTTGA TGTGACGTTA
GCTTATCCTG AAAATCAAGA CTCTCCATTT ATAGATATGC TACAAGGCAA ATTAACCAAA
GTGGTTGTTC GGATAAAACT TCATGCTAAT GATGAAAAAG TGAACGGCGA TTATTTTGAA
GATAAAGTAT TTAGACGCGG TTTTCATCAA TGGATTAATG AGTTATGGAA AGAAAAAGAT
GAGTATCTAC AGCGTATCTT GAAAAGATAA
 
Protein sequence
MKIFMFANIR LVISTLLVIL NTALTSFIIS FFAVIKFILP FPFVKKLMVS MANKTLWCWA 
TLNLWMLNIN NTIDWVVDGG ETLSQEKWYL LLSNHVSWAD IVILSSVMKD KVPMTKFFLK
YELLYVPFVG LACWGADMPF MRRNPERKDD DFKAIQKSCE NFRSVPTTVV NFVEGTRATP
DKLKEARTPY QHLFKPKIGG VAFTLSAMGE LFDGIVDVTL AYPENQDSPF IDMLQGKLTK
VVVRIKLHAN DEKVNGDYFE DKVFRRGFHQ WINELWKEKD EYLQRILKR