Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0043 |
Symbol | |
ID | 6986277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 46481 |
End bp | 47350 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643378412 |
Product | putative acyltransferase |
Protein accession | YP_002261601 |
Protein GI | 209693673 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATTT TTATGTTTGC TAATATTCGA CTCGTCATTA GTACTTTGCT TGTAATCCTA AATACGGCTC TGACGTCATT TATTATCAGC TTTTTTGCTG TAATTAAATT TATTCTGCCT TTTCCTTTCG TAAAGAAATT AATGGTATCA ATGGCGAATA AGACCTTATG GTGTTGGGCT ACGTTGAATT TATGGATGCT CAATATTAAC AATACAATTG ATTGGGTTGT TGATGGGGGG GAAACGCTAT CTCAAGAAAA GTGGTATTTA TTGTTATCTA ACCACGTAAG TTGGGCTGAT ATCGTTATTT TATCCTCCGT GATGAAAGAT AAAGTGCCAA TGACTAAGTT CTTTTTGAAA TATGAACTGC TCTATGTTCC CTTTGTCGGG CTTGCATGTT GGGGGGCGGA CATGCCCTTT ATGCGCCGAA ACCCTGAACG CAAAGACGAT GACTTTAAAG CGATTCAAAA GTCGTGTGAA AACTTTCGCT CAGTGCCGAC TACGGTGGTT AATTTTGTTG AAGGAACACG AGCGACGCCT GATAAATTAA AAGAAGCGCG TACGCCTTAT CAACATTTGT TCAAGCCAAA GATTGGTGGT GTGGCATTTA CGTTATCAGC GATGGGTGAA CTGTTTGATG GAATCGTTGA TGTGACGTTA GCTTATCCTG AAAATCAAGA CTCTCCATTT ATAGATATGC TACAAGGCAA ATTAACCAAA GTGGTTGTTC GGATAAAACT TCATGCTAAT GATGAAAAAG TGAACGGCGA TTATTTTGAA GATAAAGTAT TTAGACGCGG TTTTCATCAA TGGATTAATG AGTTATGGAA AGAAAAAGAT GAGTATCTAC AGCGTATCTT GAAAAGATAA
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Protein sequence | MKIFMFANIR LVISTLLVIL NTALTSFIIS FFAVIKFILP FPFVKKLMVS MANKTLWCWA TLNLWMLNIN NTIDWVVDGG ETLSQEKWYL LLSNHVSWAD IVILSSVMKD KVPMTKFFLK YELLYVPFVG LACWGADMPF MRRNPERKDD DFKAIQKSCE NFRSVPTTVV NFVEGTRATP DKLKEARTPY QHLFKPKIGG VAFTLSAMGE LFDGIVDVTL AYPENQDSPF IDMLQGKLTK VVVRIKLHAN DEKVNGDYFE DKVFRRGFHQ WINELWKEKD EYLQRILKR
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