| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0006 |
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| Symbol | |
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| ID | 6989177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 4820 |
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| End bp | 5557 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643378379 |
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| Product | putative amino-acid ABC transporter ATP-binding protein |
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| Protein accession | YP_002261568 |
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| Protein GI | 209693640 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00283619 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAAA TAACCAATCT ACATAAAAGC TTTGGAACCA CAGAAGTCCT CTCTGGCATC
GATTTAACGA TTAATAAAGG AGAGATAATT GCGATTATAG GATCGAGTGG AACCGGTAAA
TCAACGCTGC TCAGATGCAT CAATTTTCTT GAAACCGCAG ACCAAGGCAC CATAACAATC
GATGATGTCA GTGTTAATAC AGAAAAATAT ACCAAAACAG AAGTACTCGC ATTACGACGA
AAAACAGGGT TTATCTTTCA AAACTACGCC CTTTTCGCCC ACTTAACGGC AAGGCAAAAC
ATTGCAGAAG GCTTAATAAC TGTCCACAAG TGGAATAAAG CCGACGCATT AAAACGATCA
CAACAAATCT TAGATGATAT TGGACTCGGA GACAAAGGGG ATAGCTACCC TGCAGCCCTC
TCTGGAGGAC AACAACAACG TGTTGGTATT GGTAGAGCAA TGGCATTAGA AACAGAGTTG
CTATTGTTTG ATGAACCCAC GTCAGCACTC GATCCTGAAT GGGTAAATGA GGTTCTGACA
TTGATGAAAA AACTGGCTAC CCAACATCAA ACGATGTTGG TCGTTACGCA TGAAATGCAA
TTTGCCAAAG AAGTGGCTGA TCGTGTTATC TATATGGCCG ATGGAAAGAT CGTAGAACAA
GGAACACCAG AGCAGATTTT TGGTTATCCA CAGGATCTGA AATTAAAGAA ATTCTTAAAC
CAAGTTGGGA TCGCATAA
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| Protein sequence | MIKITNLHKS FGTTEVLSGI DLTINKGEII AIIGSSGTGK STLLRCINFL ETADQGTITI
DDVSVNTEKY TKTEVLALRR KTGFIFQNYA LFAHLTARQN IAEGLITVHK WNKADALKRS
QQILDDIGLG DKGDSYPAAL SGGQQQRVGI GRAMALETEL LLFDEPTSAL DPEWVNEVLT
LMKKLATQHQ TMLVVTHEMQ FAKEVADRVI YMADGKIVEQ GTPEQIFGYP QDLKLKKFLN
QVGIA
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