| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_p08207 |
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| Symbol | |
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| ID | 5552728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009777 |
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| Strand | - |
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| Start bp | 36775 |
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| End bp | 37542 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640898084 |
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| Product | conjugal transfer outer membrane protein TraH |
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| Protein accession | YP_001436074 |
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| Protein GI | 156936723 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02781] P-type conjugative transfer protein VirB9 |
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Plasmid Coverage information |
| Num covering plasmid clones | 59 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAC AACTGATTGT CTCTTTGGCG TGCTTGATGG CGTTTTCCAC TCACGCCTTA
ACCCTGCCAA AGCATCAAGG CAAAGACCGC CGCATCGTGT ATGCAGAGTA CGACCCCAGT
GATGTGATTG CGATACGCAC CAAAGTGGGC GTCGCCACCC TCATTCAGCT CGACAAGAAT
GAAACCATTG TTGGCGAGCA TTCTGGCTTA GGGATGGGGG ATGCCGCCGC ATGGGGGTTT
AACGTGCGTG GTAATAACGT GTTCTTTAAA CCTCAAGCCA AGCAACCCAA TACCAACTTA
ACCATCGTGA GCGATTTGGG GCGCACCTAC TCATTTGAAC TGTTCACCAA TAAACAGCCG
TTCTATGTGG TGAAAATGCG TTACCCCAAA CCGAAGAAAG CCAACACTAC CCCTCTCAAA
GCCCCTTGTA CTGATGGAAA ATACAACTTC CGTTACGTGA AGTGGGGCGA TGAGGAATTA
GCCCCCGCCT ACGCGTGGGA CGATGGCCGT TTCACTTGCA TGAAGTTTAC TAAAAACGCC
GAGCTGCCCG TGATTTACCA AATCAACGCC GACAGCAAAG AGTCGTTAGT GAACTACCAC
ATTGAGCAAG ACACCATCGT GATCCATTCG GTCGCCAACG AATACCGTTT GCGCCTTGGT
GAACGTGTTC TAGGGGTGCT TTCTCACTTT GTCGAGTTCG CTGGCCACAA CCAAAAAGCG
AGCTCGATTA AAGCCACTCG CGTCATTAAG GAGGACGAAC ATGAGTGA
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| Protein sequence | MMKQLIVSLA CLMAFSTHAL TLPKHQGKDR RIVYAEYDPS DVIAIRTKVG VATLIQLDKN
ETIVGEHSGL GMGDAAAWGF NVRGNNVFFK PQAKQPNTNL TIVSDLGRTY SFELFTNKQP
FYVVKMRYPK PKKANTTPLK APCTDGKYNF RYVKWGDEEL APAYAWDDGR FTCMKFTKNA
ELPVIYQINA DSKESLVNYH IEQDTIVIHS VANEYRLRLG ERVLGVLSHF VEFAGHNQKA
SSIKATRVIK EDEHE
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