Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_p08202 |
Symbol | |
ID | 5552733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009777 |
Strand | - |
Start bp | 31893 |
End bp | 32429 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640898079 |
Product | sex pilus assembly and synthesis protein |
Protein accession | YP_001436069 |
Protein GI | 156936718 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 59 |
Plasmid unclonability p-value | 0.994682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACACA AACTGTTTAT GGCCGCTATC ACAGCGGCTT TTTTATTGCC TGTTCAACCC GCTTTCGCGG CAAGCGACGA TGAATGTGCT ATTTGGCTTT GTCTTCCGAC AGGCTTTCCA AGTGGTTGCA GTGGCGCTAA GAAAGCGTTC GTAAAGCGTA TTAAGAAGTT CAAACCGCCC CTTCCAAGCT TTACGTCCTG TTTGTTTTCC GGCGACGTCC CTATTGGCAC ACCGTCGAAT GATACCGACA TGTTTGCTCG CGATGGCCGT GCCGCCTACA TCCCACCACG CGTTGAATGC GTGAAGTGGG AAACAGGCAA AGACTGGAGC CGATGCAGTA AAACAGAGGT TCGACCGAGC CAAATCATTA AAAACCAGAG CTGCCATGTG AACCACAAAG AAGGGACTTC AAGTCCAAAA TATTGCTCAC ATACCATCAG CTACGTTGAA ACGTTCCAAG ATGGCGAGCA GTACGGGGAA ACCTATTACT TCGATAATGC AGGGAACACG TACATCGAAG GCTCAACCGA ACACTAG
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Protein sequence | MKHKLFMAAI TAAFLLPVQP AFAASDDECA IWLCLPTGFP SGCSGAKKAF VKRIKKFKPP LPSFTSCLFS GDVPIGTPSN DTDMFARDGR AAYIPPRVEC VKWETGKDWS RCSKTEVRPS QIIKNQSCHV NHKEGTSSPK YCSHTISYVE TFQDGEQYGE TYYFDNAGNT YIEGSTEH
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