Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_07099 |
Symbol | |
ID | 5557420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 2172022 |
End bp | 2173578 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640911565 |
Product | hypothetical protein |
Protein accession | YP_001449198 |
Protein GI | 156978292 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTGCGAT GGCAAAATAT CAAAGAGGGC AAGGAAGGAA ATAATTATAA CGAGGACTAT CAAATGATAG AAAATAGCTT TGCTATCACG ACCACTTTCG TGGCGTACTT ACTAATTATG GTTGCCATTG GCGTTTACGC GTATAAGAGG ACTTCCAATT CATCTGACTA CTTCCTAGGT GGTCGTAGCC TTGGTCCATG GCCAGCGGCA CTCTCTGCGG GCGCATCAGA CATGAGTGGC TGGTTGCTAC TTGGTCTTCC GGGGTATGCG TATGCAGCAG GTATTGAAGC GTTTTGGCTA GCAGCTGGTC TGCTTGTGGG TACATGGCTA AACTGGTTAA TCAGTGCAAA ACGCCTACGT ACGTACAGCA TTCAAACGGA TGCACTAACG CTGCCTGAAT TCCTGTCGCG TCGCTTTAAC GATAAGTCGA AACTGATTCA GACAATCTCT GCGTTCTTCA TTCTTCTATT CTTCCTTTTC TACACCAGCT CAGGCTTGGT AGCAGGTGGT AAACTGTTTG AGACCGTATT CGGCTTGGAT TACAGCATTG CCGTTATCGT TGGTACGGTG TGTGTGGTTT CATACACGCT ATTTGGTGGT TTCCTAGCGG TATCTTGGAC GGACTTGGTA CAAGGTCTAT TGATGGCGGC GGCGCTGATG ATCGTGCCTG TTGCCGTTAT GGATGGTGGC CTAGGTCAAC TAGCGACGGA TATGCACAAC ATCAACCCAG AGCTATTAAC GCTATGGAAC GACGTAAAAG GTGAGCCTCT ATCGGCTGTC GCGATCAGCT CTTTGGTGGC ATGGGGTCTT GGTTACTTTG GTCAACCGCA CATCCTAGCG CGTTTTAAAG CTTCTCGTTC AAATAAAGAT CTAACAACAG CGCGTCGTAT CGCTGTGGGT TGGACTGCGC TTTCTATGGC GGGTGCAATG CTAGTTGGTC TTGTTGGTCT AGTGTGGGTA ACTGGTCACC CTGGTATGCA GGTTGATGAT GGCGAGAAAA TCTTCATGCT ATTGGTGAAC ACGGTATTCC ACCCAGTGAT TGCAGGTATC CTATTGGCGG CAATCCTAGC GGCGGTAATG AGTACAGCAG ATTCACAGCT TCTAGTATCT TCATCAGCTC TTGCAGAAGA CTTCTACAAG CAAGTGATTA AGCCAGATGC AACGTCTGAA GAAGTGGTCA TGATTGGTCG TGTAGGCGTT ATCGTGATTT CTCTTATCGC GCTATTCCTA GCAATGACGC CAGACAGCTC TGTTCTTGGT CTTGTATCTT ACGCTTGGGC AGGCTTTGGT GCTGCGTTTG GTCCAGCAGT TGTGCTTAGC CTTTACTGGA GCTGCATGAA CCGTAACGGC GCACTAGCAG GTATCCTAAT CGGTGGCGTG ACTATCGTTG TTTGGAAACA GCTAACAGGC GGTTGGTTCG ATGTGTACGA AATCGTACCG GGCATCATCT TCTCTACTAT CGCTATCGTG GTGGTGAGCA AAATGACTGG CGGTGCAGCG CAAGAAGTAC TTGAGCAACA CAAAGAATAC GAGAAGAAAT TGGTTGAGCT AGACTAA
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Protein sequence | MLRWQNIKEG KEGNNYNEDY QMIENSFAIT TTFVAYLLIM VAIGVYAYKR TSNSSDYFLG GRSLGPWPAA LSAGASDMSG WLLLGLPGYA YAAGIEAFWL AAGLLVGTWL NWLISAKRLR TYSIQTDALT LPEFLSRRFN DKSKLIQTIS AFFILLFFLF YTSSGLVAGG KLFETVFGLD YSIAVIVGTV CVVSYTLFGG FLAVSWTDLV QGLLMAAALM IVPVAVMDGG LGQLATDMHN INPELLTLWN DVKGEPLSAV AISSLVAWGL GYFGQPHILA RFKASRSNKD LTTARRIAVG WTALSMAGAM LVGLVGLVWV TGHPGMQVDD GEKIFMLLVN TVFHPVIAGI LLAAILAAVM STADSQLLVS SSALAEDFYK QVIKPDATSE EVVMIGRVGV IVISLIALFL AMTPDSSVLG LVSYAWAGFG AAFGPAVVLS LYWSCMNRNG ALAGILIGGV TIVVWKQLTG GWFDVYEIVP GIIFSTIAIV VVSKMTGGAA QEVLEQHKEY EKKLVELD
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