| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_07096 |
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| Symbol | |
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| ID | 5557419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | + |
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| Start bp | 2168097 |
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| End bp | 2171228 |
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| Gene Length | 3132 bp |
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| Protein Length | 1043 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640911563 |
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| Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_001449196 |
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| Protein GI | 156978289 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
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| TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTACTG CAAAGAACGT GTTAACACCG GAATTTATCG AGCAGCCGCT TGATAAGTTG
TGGTCACTGA TCTCGCCATT GTACATGGTG GACGAGTCTC AATGGCTAGA GCAATTATTG
CCACTAGCGA CGCCGACAGC GGAAGAAAAA TCGGCAATCA CGATCCAAAC AACCCAGCTT
ATCGAAGCCA TCCGTACGGA TAAGAAGTCA ATTCAGATGA TTGATGCGCT ACTGCTGGAA
TACAGCTTAG ATACTCATGA AGGTATCTTG CTGATGTGTC TTGCAGAAGC ATTGATGCGT
ATTCCGGATT CAGCAACGGC GGATGCACTG ATTAAAGATA AGTTAAGCGT TGCTGACTGG
AAATCTCACC TAAAGAGTTC TGATTCGGTT TTCGTTAACG CGTCAACTTG GGGCTTAATG
CTAACGGGTA AAGTGATTGG TCTTGGTGAG CAAGAAACCC AGAGCCCAGG TCAGGCTGTA
AACCGTCTGG TGAACAAATT CTCAGAACCT GTGATTCGTA AAGCCATGTA TCAGGCAATG
AAGATCATGG GTCATCAGTT TGTACGTGGT CGTACGATTG AAGAAGCACA GAAGAACGGT
CGCCCAATGC GCGACAAAGG TTTCACTTAC TCATTTGATA TGTTGGGTGA AGCGGCGCTA
ACCACGGCAG ACGCAAGCAA GTATTTCAAA GACTACCTAA TGGCGATTGA AGCCGTTGGT
CGCGAAACGT ACGGCAGTGA CACAAGCCCT GCACCTTCTG TTTCTATCAA GCTTTCTGCA
CTTCACCCAC GTTACGAAGT GGCGAATGAA GAACGCGTGA TGACAGAGCT TTACGACACC
TTAACGCAAC TGCTTAAGCG CGCTATCGAG GTGGATGTTG CCATCACGAT TGATGCAGAG
GAAGCGGACC GTCTTGAGCT GTCATTAAAA CTGTTTGAAA AACTGTATCG CAGTGACCTA
GTGAAAGGCT GGAGTAAGTT TGGTCTGGTG GTTCAAGCCT ACTCGAAACG TACACTGCCA
GTATTGGTAT GGCTAAACGG TCTAGCGAAA GAGCAGGGTG ATCTGATCCC ACTGCGTCTA
GTAAAAGGCG CGTACTGGGA CAGCGAAATC AAGTGGTCGC AACAAGCGGG TTACGAGAAC
TACCCTGTTT ACACGCGCAA AGAAGCGACG GATGTTGCTT ACCTAGCGTG TGCTCGCTTC
CTACTAAGTG AAGGCGTTCG TGGCAATATC TTCCCGCAGT TTGCTAGTCA CAACGCGCAC
ACTGTTACGG CGATTGCTGT AATGGCAGAG CACAAAGATT ACGAATTCCA ACGTCTGCAT
GGTATGGGTG ATTCGCTTTA TAACCATGTA ATGGACACTT ATGGTCAGCC AGTACGTATT
TACGCGCCAG TCGGTAGCCA TGCGGATCTA CTGCCTTACT TGGTTCGTCG CTTACTAGAA
AACGGTGCGA ACAGCTCGTT TGTGCACCGT TTGGTGGACG CGCGTTGTCC GATTTCAGAG
CTGACGCATC ACCCTGTTGA TGTGCTGACC TCTTTTGAGA CGCTACACAA CGGTCAAATT
CCAATGCCAA CCGGCATCTT CCCAGAGCGT AAAAACTCGT ACGGTGTGAA CGTTGATATC
GATAGCGAAG CGAAGCCGTT TGAAGCGCAG GTTGAAAGCT TCCTGAATCA GAAGTGGACT
GCGGGTCCGA TCATCAACGG CGAAAAACAT GCCGAAAGCA TGATCAAGGA AAACTCCGCA
GAGATCATTA CTGCCCCTTA CGATCGTCGT ATTGAAGTGG GTCAGGTGGC TTTCGCAAGC
CTTGATCATG TTTCCGCTGC AATCGAAGCG GCTGATGCTG CATTCCCAGA GTGGAAAGGC
ACCGCAATTG AACAAAAAGC GGCGTGCCTA GATAAGCTTG CGGATCTGAT GGAAGAAAAC
TTGGCTGAGC TGGTGGCGAT TTGTCACCAA GAAGCAGGTA AGACGATTCA TGACAGTATT
GATGAAGTGC GTGAAGCGGT CGATTTCTGT CGTTACTACG TGAAACAAGC GCAAAACCTT
CAACCGTTCG AATTAGAAGG CTTTGATGGC GTGAAACGCA TTTCTAGCCG CGAAGGGCTT
GGCGTATTCG TTTGTATCAG TCCATGGAAC TTCCCATTAG CGATCTTCCT TGGTCAAGTC
ACAGCGGCAT TGGTTGCAGG TAACACAGTT GTGGCTAAGC CAGCTGAGCA AACCAGCTTA
ATTGCGGCGC GTACGATTGA ACTGATGCTA GAAGCCGGCT TCCCGGCGGG CGTGATTCAG
CTATTGCCGG GTCGTGGTGG TGAAATTGGT CATGCACTAA CGTCTCATGA TGCGATTGCT
GGTGTGGCAT TTACTGGTTC GACAGCAACG GCGCAGCGCA TCAACGTGAC GCTTGCCGAG
CGTAGCGCGA AGCCAGTACC GTTTATCGCT GAAACTGGCG GTCAAAACGC CATGATTGTG
GATAGTACGG CGCTACCAGA GCAAGTTGTG CGTGATGTGA TTCGTTCCGC TTTCGCTTCT
GCTGGTCAAC GTTGTTCCGC TCTGCGCGTT CTGTTCGTTC AAGAAGACGT TGCGGATCGC
ATCATCAACC TTATCCAAGG TGCAATGAAT GAACTGCATG TTGGTATTCC TTACCTACAC
AAAACCGATG TGGGTCCGGT TATCGACAGC AATGCAAAGA ACAAACTCCT TGCTCACCTA
GAGCACATGA CAAGTACGCA AACCAAAGTT GCTCAATTGC AGTTGGATGA AGCGTGTCAG
CACGGTGATT TTGTATCACC AAGTGCGTTC GAAATCTCGG GCATTGATGT TCTGAAAGAA
GAGCAATTCG GTCCTATCTT GCACATTGTT CGCTTTAAAG CGTCTGAGTT GCCAAATGTG
GTTGAGCAAA TCAACCAAAC TGGTTTTGGT CTCACAATGG GCATCCACAG CCGTAACGAA
ACCACTTACC GTTGGATTGA AAAACACGCT CGTGTGGGTA ACTGCTACAT CAACCGCGAT
CAGGTCGGTG CGGTGGTTGG CGTTCAGCCA TTCGGTGGTC AAGGTTTGTC GGGTACGGGT
CCGAAGGCTG GTGGTCCTCA CTACCTATAC CGCTTTACTA AACAACATCT TGCTCAAGCA
GAGAAGGCGT AA
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| Protein sequence | MFTAKNVLTP EFIEQPLDKL WSLISPLYMV DESQWLEQLL PLATPTAEEK SAITIQTTQL
IEAIRTDKKS IQMIDALLLE YSLDTHEGIL LMCLAEALMR IPDSATADAL IKDKLSVADW
KSHLKSSDSV FVNASTWGLM LTGKVIGLGE QETQSPGQAV NRLVNKFSEP VIRKAMYQAM
KIMGHQFVRG RTIEEAQKNG RPMRDKGFTY SFDMLGEAAL TTADASKYFK DYLMAIEAVG
RETYGSDTSP APSVSIKLSA LHPRYEVANE ERVMTELYDT LTQLLKRAIE VDVAITIDAE
EADRLELSLK LFEKLYRSDL VKGWSKFGLV VQAYSKRTLP VLVWLNGLAK EQGDLIPLRL
VKGAYWDSEI KWSQQAGYEN YPVYTRKEAT DVAYLACARF LLSEGVRGNI FPQFASHNAH
TVTAIAVMAE HKDYEFQRLH GMGDSLYNHV MDTYGQPVRI YAPVGSHADL LPYLVRRLLE
NGANSSFVHR LVDARCPISE LTHHPVDVLT SFETLHNGQI PMPTGIFPER KNSYGVNVDI
DSEAKPFEAQ VESFLNQKWT AGPIINGEKH AESMIKENSA EIITAPYDRR IEVGQVAFAS
LDHVSAAIEA ADAAFPEWKG TAIEQKAACL DKLADLMEEN LAELVAICHQ EAGKTIHDSI
DEVREAVDFC RYYVKQAQNL QPFELEGFDG VKRISSREGL GVFVCISPWN FPLAIFLGQV
TAALVAGNTV VAKPAEQTSL IAARTIELML EAGFPAGVIQ LLPGRGGEIG HALTSHDAIA
GVAFTGSTAT AQRINVTLAE RSAKPVPFIA ETGGQNAMIV DSTALPEQVV RDVIRSAFAS
AGQRCSALRV LFVQEDVADR IINLIQGAMN ELHVGIPYLH KTDVGPVIDS NAKNKLLAHL
EHMTSTQTKV AQLQLDEACQ HGDFVSPSAF EISGIDVLKE EQFGPILHIV RFKASELPNV
VEQINQTGFG LTMGIHSRNE TTYRWIEKHA RVGNCYINRD QVGAVVGVQP FGGQGLSGTG
PKAGGPHYLY RFTKQHLAQA EKA
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