Gene VIBHAR_07087 details

Gene Information

• Locus tag: VIBHAR_07087
• ID: 5558825
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009784
• Strand: -
• Start bp: 2157209
• End bp: 2159131
• Gene Length: 1923 bp
• Protein Length: 640 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640911553
• Product: hypothetical protein
• Protein accession: YP_001449186
• Protein GI: 156978280
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2200] FOG: EAL domain
• TIGRFAM ID: [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAAACA TGACCCTATA TAAGAAGCTT GTAGTGGGAA TGGTTACGGT CTTTTTACTT 
TTGATGGCAT CAGTATTCGT AATCCAGTTC AACACTACTC GAGACAGCTT GGAGCAGCAG 
CAACGTTCAG AGGTCAACAA CACCATTAAC ACCGTTGGTT TGGCACTGGC ACCGTATCTA 
AAAGACAAAG ATAAGGTCGC CGTTGAATCC GTGATTAATG CGTTGTTCGA CGGCAGTACT 
TATTCTGTCG TACGTCTCAC CGCGTTAGAT TCCGATTACC AAATCGTACG TTCATACCCG 
GTGAAACCGA CAAGTGTGCC GCAATGGTTT ATCGATTTAA ATCTGTTCAA AGCCATTCAC 
GACAAACGCG TGGTAACCAG CGGTTGGATG CAGCTTGCAG AGGTAGAAAT CATCAGCCAC 
CCAGGTGCAG CATACGACCA GCTGTGGCAA GGCTTTGTTC GCCTGCTGAC TGCGTTTGGC 
GTTATCTTCC TTGCTGGTCT AGTGGCGATT TCTTACATCC TACGTCGCTC ACTCAAACCT 
TTAGCGGCCA TCGTGAAGAA AATGCACGAG ATTGCTAACA ACCAATTTGG CGACCCACTG 
GCTCGTCCAA AAACCAAAGA TTTGATTGCA GTCGTCGACG GCATCAACTC AATGTCGGCA 
CAAATCGAAC TGTCATTTAA AGAACAGGCA AAAGAGGCGC AGCGTCTGCG TGCTCAAGCT 
TACCTAGATC CAATCTCCAA ACTGGGTAAC CGCTCGTTCT ACATCAACCA AGTTGATCAA 
TGGCTGGCAG AGCAAACGCA AGGGGGTATC GCGCTACTCC ATGCTGAGTA CATTGGTGAC 
ATTTACGAGA CCAAAGATTA CCAACGCGCC GATGCCCACG TGAAAGAGTT ATCTCAACGT 
CTCAAGAACA CCATCGATGT ACCGGGAGCA ACCATTGCTC GTCTGTCTAG CGACGAATTT 
GGTCTACTAT TCCCGCACAT GGATGAGAGC GAGTTACGCA TTCTTGCAGA CAGCATCGTC 
AACTGTGTGA ATGGCCTTAA TACCGATCCT ACTGGCATGG CGAAACCAAA AGCATCACTG 
GGTGTCGCGC ACAGTAAAGA TCAGAAAACA CGTACAGAAG TGTTATCGAT GGTGGATAAC 
GCCCTATCGA AAGCCAAAGC GCAGCCAGAT AAAGCTTACG GCTTCGTGGG TGGTGAAAAC 
ACCTCGAACC TAATGGGTAA ACAGCAATGG AAAGCGCTGG TTGAAGAAGC GATTCACAGC 
GATTGGATTA AATTCCGCTT CCAGTCTGCG AAGAATACTT GGGGTAAAGT CTTCCATAAT 
GAGGTGTTCT CAAGCATCGA AAAAGATGGT GAAACCTACC GTGCGAACCA ATACTTGTTT 
GCTCTTGAAC AGTTAGAAGC AACCAACATC TTCGACCAAT ACGTCATCGA GTCGATGATC 
AAGATGCTTG AAAGTGGCGA ACTAAAAGAA CCAGTAGCCA TCAACATTGC CCAAAGTAGC 
TTGTCTCAAC CATCGTTCAT TCGTTGGACC ACCAGCATGC TAGAGAAGCA CTCAAAAGTG 
GCTCCAATGC TGCACTTTGA GCTTCCAGAA GCGTGTTTCA TTGACCATCC GCACCACACT 
GCTCTGCTGT GTAATGCGAT TCGTCAAGCG GGTGCGGAGT TCGGTGTTGA TAACTACGGC 
CGTAACTTCC AGTCACTTGA GTACATTCAG GAATTCCGCC CGAATTACGT AAAACTGGAT 
TATCTGTTCA CCCACAACTT GCACGACGAG AAACAAAAAT TCACGCTGAC ATCGATTTCT 
CGTACCGCTC ACAACTTGGG TATTACGACG ATTGCATCGC GTGTTGAAAC ACAGATTCAG 
TTGGATTTCC TAACCGAGCA TTTCGTTGAA GTCTTCCAAG GCTTCATTGT CGACAAGGAA 
TAA 

 

Protein sequence

MKNMTLYKKL VVGMVTVFLL LMASVFVIQF NTTRDSLEQQ QRSEVNNTIN TVGLALAPYL 
KDKDKVAVES VINALFDGST YSVVRLTALD SDYQIVRSYP VKPTSVPQWF IDLNLFKAIH 
DKRVVTSGWM QLAEVEIISH PGAAYDQLWQ GFVRLLTAFG VIFLAGLVAI SYILRRSLKP 
LAAIVKKMHE IANNQFGDPL ARPKTKDLIA VVDGINSMSA QIELSFKEQA KEAQRLRAQA 
YLDPISKLGN RSFYINQVDQ WLAEQTQGGI ALLHAEYIGD IYETKDYQRA DAHVKELSQR 
LKNTIDVPGA TIARLSSDEF GLLFPHMDES ELRILADSIV NCVNGLNTDP TGMAKPKASL 
GVAHSKDQKT RTEVLSMVDN ALSKAKAQPD KAYGFVGGEN TSNLMGKQQW KALVEEAIHS 
DWIKFRFQSA KNTWGKVFHN EVFSSIEKDG ETYRANQYLF ALEQLEATNI FDQYVIESMI 
KMLESGELKE PVAINIAQSS LSQPSFIRWT TSMLEKHSKV APMLHFELPE ACFIDHPHHT 
ALLCNAIRQA GAEFGVDNYG RNFQSLEYIQ EFRPNYVKLD YLFTHNLHDE KQKFTLTSIS 
RTAHNLGITT IASRVETQIQ LDFLTEHFVE VFQGFIVDKE