Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_07029 |
Symbol | |
ID | 5558638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 2105236 |
End bp | 2105934 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640911497 |
Product | ABC-type transporter ATPase component |
Protein accession | YP_001449130 |
Protein GI | 156978224 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCGTTT TTAATCAACT TAGTCGCGAT TACGCCCTTG GCAGCCAAAC GGTGCGTGCC TTGCGAGAAG TGTCTGGTGA AGTGTTTTCC GGCGAAATGG TGGCTCTGTG CGGGCCGTCT GGTTCAGGCA AAAGCACCTT ACTTAACGTG CTTGGCATGC TGGATACTCA ATACCAAGGT CAGGTGACAT TTGCGGGCAG CCCATACCCA ACTGGGCAAA TGCAGGCGGC GAAAATGCGC CGAGAAAAGC TTGGCTTTAT ATTTCAAAAA TTCAATCTTG TGCCTGTGAT GACAGCGTTG GAGAACGTGG CGTATCCGCT ACATCTCAAC GGCTTCTCAA AAGCAGAACA AACTGAGCTC GCTACACAAA TGCTAGAACA CGTTGGCTTG GGCGAGTTTA TTCATTATAT GCCCGATAAC TTGTCGGGCG GTCAGCAACA ACGCGTGGCA ATTGCTCGAG CGTTAGTACA CAAACCAGCA CTGGTGATTG CTGATGAGCC AACCGCAAGC CTTGATAGCC AAACGGCCAA CAAGGTCATC GACATTATGA AAGGGCTCGG ACACGAGCTA GGCACCACTT TTATCGTCGC TACACACGAC CCTCGAATGG CATCCCGCTG CGATCGAACC ATTGAGTTGG TAGATGGCAA GATTACCCAA ACGGACGCGA GTGTGGAGGA GGTTTCATGG GCAAGCTAA
|
Protein sequence | MIVFNQLSRD YALGSQTVRA LREVSGEVFS GEMVALCGPS GSGKSTLLNV LGMLDTQYQG QVTFAGSPYP TGQMQAAKMR REKLGFIFQK FNLVPVMTAL ENVAYPLHLN GFSKAEQTEL ATQMLEHVGL GEFIHYMPDN LSGGQQQRVA IARALVHKPA LVIADEPTAS LDSQTANKVI DIMKGLGHEL GTTFIVATHD PRMASRCDRT IELVDGKITQ TDASVEEVSW AS
|
| |