Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_07024 |
Symbol | |
ID | 5558428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 2099997 |
End bp | 2100788 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640911492 |
Product | transcriptional regulator |
Protein accession | YP_001449125 |
Protein GI | 156978219 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3279] Response regulator of the LytR/AlgR family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACTG GGTTTACTGC GATTATTGCT GATGATGAAC CGTTATTGAG GCGTCATCTA GATAAAAGCC TAGCTGAAGT GTGGCCTGAG CTAGAGGTGA TAGCCAAAGT CGCGGATGGT GAACAAGCGT TGCAGGCCAT TGAGCAAAGC CAACCTGACA TTGCGTTTCT TGATATTCGT ATGCCAGTTT TGGATGGTAT GACATTAGCG CAAAAACTCA ATCAACTCGC CAACCCACCT TTGATTGTAT TTGTCACTGC GTACGATGAT TACGCCATCA AAGCCTTTGA ACAAAATGCC GCCGATTATT TGCTCAAGCC TATCTCGGAT GAGCGCCTCC TGACAACGTG TGAAAGAGTG AAAGCACGCC TTGCTAAGCG AGAGCAAGAA AGCAGCAATG TGCAGATGAG CAGCCTGTTA GAACAGTTGC AGCAATTATC CGCGCCACAA ACGCCGCAGT ATTTACAGTG GATCAAAGCG ACGCAAGGGG AAGATATTCA TCTGATCGCC ACATCTGATG TGTTGTATTT CAAAGCGGAA GAAAAATACG TTTCTGTATA TGCGCAGCAA GGACAAGGCA AAGTACAAGA GTATTTGATT CGCACATCGT TGAAAGAGTT GATAGGGCAG CTTAACCCAG AACAGTTCTG GCAAGTGCAC CGTTCAAGCG TGGTGCAAGT ATGTAAAATT AACAAAGTAA ACAAAGACTT TGCTGGCAGA ATGTTTGTTC ACGTTGGAGA AAACAAGCTC CCTGTGAGCC GTGCATCTCA AAGTTTGTTC AAAGGGATGT AA
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Protein sequence | MNTGFTAIIA DDEPLLRRHL DKSLAEVWPE LEVIAKVADG EQALQAIEQS QPDIAFLDIR MPVLDGMTLA QKLNQLANPP LIVFVTAYDD YAIKAFEQNA ADYLLKPISD ERLLTTCERV KARLAKREQE SSNVQMSSLL EQLQQLSAPQ TPQYLQWIKA TQGEDIHLIA TSDVLYFKAE EKYVSVYAQQ GQGKVQEYLI RTSLKELIGQ LNPEQFWQVH RSSVVQVCKI NKVNKDFAGR MFVHVGENKL PVSRASQSLF KGM
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