Gene VIBHAR_06936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06936 
Symbol 
ID5556976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp2031297 
End bp2032319 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content46% 
IMG OID640911404 
Producthypothetical protein 
Protein accessionYP_001449037 
Protein GI156978131 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA AGAAAAGAGC GGCATCCATC TATGATGTTG CCAAGTTGGC AGGTGTGTCA 
CCGAGCACCG TATCACGTTT CCTCAATCGC ACGACCTTTG TCTCTGATGA TAAAAGCCAA
AACATAGAAA AAGCGATCAA GTCACTGGGC TATAAGCCAA ATTATCAAAT GGGTCAGGGC
ACTAACACGC GTTCTATGAC CATTGGCGTT CTTATCCAAC ACCCAGAAAG CCCGCACTCC
AGTCGTATCC TTAATGATAT GGAAAAGGTT CTGAATACTC AGGGTTACTC GTTGGTGATT
GCGACGGGGC ATTGGCAGCG TTCATTGGAA TCGCATTCTT TGGAGTATTT GGCGAAGAGC
AATGTCGATG GGGTCATCAT TGTAACGGGC AGTTTGACGG AAGCGCAGAT ACTGGAATAT
GCAGAGCGAA TTCCGGTTGT TGCAGTTGGA TACAATGTCA TTGGCGATAA GGTTCGATCC
ATAAATATAG ATAATGTATT GGGCGGATAC ATGGCGACAC TACATTTGAT GCAACAAGGT
CATGTGAACA TCGCTCATAT CAAAGGTCTT TTGAATCAAC CAGATGCGGT GGCTCGCTTT
GTTGGTTACA AGAACGCTCT GCAAGAGGCA GGCATTAAGG TGATGCCAAA ATTAGTCAAA
CAAGGTGATT TCAGCAGTGA GTCTGGTTAT CAAAAAACGG TGGAATTGCT CGAATCTAAA
GTGCATTTCT CTGCATTGTT TGCTGCCAAT GACCAAACGG CTTATGGGGC GATCAAGGCT
CTGCATGACC ACGACGTTCG TGTGCCAGAG GATGTGTCTG TGATCGGCTT TGATGACTTG
CCGACCTCAC AATATTTCAC GCCAGCACTT ACGACACTGA GACAGCCGAT TGAAGAAGTT
GGAGCCATTT GTGCCGAGTC CATACTCAAT TTATTGAGTG GTCAAAGGCA TGAAGTGCGT
CTACCTCCGA TCGATCTGAT TGTCCGCCAA TCAACGGTGT CTAAGTTCCG CCAATCAAGT
TGA
 
Protein sequence
MKKKKRAASI YDVAKLAGVS PSTVSRFLNR TTFVSDDKSQ NIEKAIKSLG YKPNYQMGQG 
TNTRSMTIGV LIQHPESPHS SRILNDMEKV LNTQGYSLVI ATGHWQRSLE SHSLEYLAKS
NVDGVIIVTG SLTEAQILEY AERIPVVAVG YNVIGDKVRS INIDNVLGGY MATLHLMQQG
HVNIAHIKGL LNQPDAVARF VGYKNALQEA GIKVMPKLVK QGDFSSESGY QKTVELLESK
VHFSALFAAN DQTAYGAIKA LHDHDVRVPE DVSVIGFDDL PTSQYFTPAL TTLRQPIEEV
GAICAESILN LLSGQRHEVR LPPIDLIVRQ STVSKFRQSS