Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06935 |
Symbol | |
ID | 5556975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 2029745 |
End bp | 2031085 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640911403 |
Product | Na+-driven multidrug efflux pump |
Protein accession | YP_001449036 |
Protein GI | 156978130 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCTAAAA GCCAGAATAT CAACCAACGT ATGTCCATCG TGGCATTGGC TTGGCCGATA CTTGTCGAAA TTTTGCTACG GACGGCTTTA GGAACCAGTG ACGTATTCAT GTTGAGTGGT TACTCAGACA AAGCCGTGTC TGCGGTTGGG GTAATCACAC AGTTAACGTT TTTCCTGATC ATCGTTTCTA CCTTTGTCAG CAGCGGCACG GGTATCTTGA TCGCGCAATA CAATGGCGCA GGGCGTGAGA AAGACTCCGT TGATGTCGGT GTTGCCAGTA TCGCTTTGTC GGTGATTGTA GGTGCTTTCT TGAGTGTGCT GGCCGTGATT GGCGCGGTGT TCTTTTTGCC GTATTACGGG CTAGAGGCTC AAGTTGAGCA GTATGCGCGT GAATATTTGC TTATCAGCGG TGCGATGACA TTCAACGTCA CCATCGGTAT TGTCTTCACC ACGATTCTAC GTAGCCACGG TTATTCACGC TCGCCAATGG TCGTTAACCT AATTTCTGGC GTGTTCAACA TCATCGGTAA CTACATTGCG CTGTATCAGC CGTTTGGTTT GCCTGTGTAT GGCGTTGAAG GTGTTGCAGT GGCGACAGTC GTGAGCCAAG TAATCGGTAC ATTATTGTTG GGCCTGATTT TGAAACGCAG CAGCATCGAA CTGCCAATGT CTAAGCTTAA ACAAGTGCCG AAAGATGTGT TCAAGAAGAT CCTAAAAATC GGTGGCATGA ACGCGGGTGA AGTGCTGTCA TACAACATGG CGCAAATCTG TATCGTCTAC TTTGTGGTGC AAATGGGCAC CTCTTCGCTC GCGGCATTTA CTTATGCACA AAACATCGCG CGTTTCTCTT TCGCGTTTGC GCTAGCGATT GGTCAGGCGG CTCAAATCCA AACGGGTTAC TACATTGGTA AAGGTTGGGT AAGCAGCATT CTGAAACGCG TGCAGATCTA CTTCTTGGTC GGCTTTGCTG CATCAACGGC GGCAACGTGT TTGATTTACC TGTTCCACGA AGAGATTTTG AGCGTGTTTA CCGATCAGCC AGAAATCTTG GCATTGGCAG GTGCCTTAGT GATGGGGTCT ATCGTGTTAG AAGCTGGCCG CGTGTTTAAC TTGATCTTCA TCTCGGCACT GAAAGGCGCT GGTGATATCA AGTTCCCAGT ACAGATGGGG ATTCTCAGCA TGTGGGGCCT GGGTGTGGTG TTCTCTTACA TCTTGGTTAT TCACTTGGGC TACGGCGTGA TTGGTGCGTG GATGGCGATT GCTTTGGATG AATGGGTACG CGGCATCATC ATGGCAAGAC GTTGGCGCTC TCAAGTATGG ACGAAGTTTA AAGTAAGCTA A
|
Protein sequence | MPKSQNINQR MSIVALAWPI LVEILLRTAL GTSDVFMLSG YSDKAVSAVG VITQLTFFLI IVSTFVSSGT GILIAQYNGA GREKDSVDVG VASIALSVIV GAFLSVLAVI GAVFFLPYYG LEAQVEQYAR EYLLISGAMT FNVTIGIVFT TILRSHGYSR SPMVVNLISG VFNIIGNYIA LYQPFGLPVY GVEGVAVATV VSQVIGTLLL GLILKRSSIE LPMSKLKQVP KDVFKKILKI GGMNAGEVLS YNMAQICIVY FVVQMGTSSL AAFTYAQNIA RFSFAFALAI GQAAQIQTGY YIGKGWVSSI LKRVQIYFLV GFAASTAATC LIYLFHEEIL SVFTDQPEIL ALAGALVMGS IVLEAGRVFN LIFISALKGA GDIKFPVQMG ILSMWGLGVV FSYILVIHLG YGVIGAWMAI ALDEWVRGII MARRWRSQVW TKFKVS
|
| |