Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06752 |
Symbol | |
ID | 5558011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 1883511 |
End bp | 1884983 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640911220 |
Product | RNA-directed DNA polymerase |
Protein accession | YP_001448862 |
Protein GI | 156977956 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCTCTT CTCATGAAGT GAGTGCCCCT TCTGGCAGCG CCCAATGGCA ATCCATCGAC TGGAAAGCGG TTGAGCGCCA TGTGTTAAGG CTCCAGATGC GCATTGCAAA AGCAATCCGA GAAGGTAAAC ACGGTAAGGC GAAAGCACTA CAGTGGATAC TGACTCACTC GAAAGCAGCA AAACTTCTCG CTGTTCGTCG AGTATCACAA AACAAAGGCA GTAAAACGCC AGGAATTGAC GGTGACATCT GGAACACCGA TGCACGTCGA ATGGCGGCAG TCAGCTTACT GAGCAGAAAA GGCTATCGAG CCAAACCGCT CAGAAGAATC TATATCCCGA AGAAAAACGG CAAACTTAGA CCATTAAGTA TCCCGTGCAT GATAGACCGA GCGCAACAAG CGTTACATCT TCTAGCACTA GAACCTATAT CGGAAACAAT TGCCGACCCT AACAGCTATG GCTTTAGACC TAACCGAAGC GCAGCCGATG CAATACAGCA GTGCTTCAAA TGCCTGTGCA AAAAGGGAGC AGCACAATGG GTTCTTGAGG GGGATATCAA AGCTTGTTTC GACAAGATAG GTCACCAGTG GCTACTTGAT AATGTCCCGA CAGACAAAAG GATGCTCAAG CAATGGCTGG AATGTGGCTA TATAGACAAA GGGCTATTCT ACAAAACGGC AGAGGGAACA CCACAAGGCG GGATAATTTC ACCCACCCTG ATGTTGCTCA CTCTTGTCGG ACTAGAAAAG TTAATTAAGT CTATCGCTCG CAAGACAGGC AGCAGAGTAA ACTTTATAGG TTATGCTGAC GACTTTGTTA TCACGGGGTC TTCAAAGGAA GTCCTAGTGA ATGACATTAA GCCGCAACTG ATGGCTTTCT TACAAGAAAG AGGTTTAGCG CTTTCTGAAG AGAAAACGCA TGTGACTCAT ATTAATGATG GCTTCGACTT TCTTGGCTTT AACGCCAGAA AGCATAAAGG AAAACTGCTC ATTAAACCGA GTAAGTCCAA CGTATTATCA TTCTTACGAA ACATGCGTGA CCTCATTAGA AAACACGCAA CAATCCCAGT AGCCGATCTC ATCAAGATGA TGAATCCAAA ACTACGAGGA TGGGCGAATT ACTATCGCCA TTGTGTTGCT AAACAAACCT TCGGCTATGT TGGACATCAG ATGTTTCTAG CGTTATGGCG ATGGTCAGTC AGGCGTCACC CAAACAAGGG ACGTAAATGG ATCGCACACA AGTACTTTCT AAACTATCAA GGGCAATGGA TTTTCCATGG CTGGTTTAAA AAGGATGGAC TGTATGGCGT GATCCGACTG TTTCAAATCG GTCAAGTGCC AATCAAACGA CATGTAAAAA TCATGAGCCA AGCGACCCCG TTCGATCCTT TTTGGGAAGG TTTTCTCAAT GAACGTAAGG TGAAAAATAC AGGTCGTAAC TCATGGTTTG CTCCTGTCGC CACTGCTTTG TGA
|
Protein sequence | MISSHEVSAP SGSAQWQSID WKAVERHVLR LQMRIAKAIR EGKHGKAKAL QWILTHSKAA KLLAVRRVSQ NKGSKTPGID GDIWNTDARR MAAVSLLSRK GYRAKPLRRI YIPKKNGKLR PLSIPCMIDR AQQALHLLAL EPISETIADP NSYGFRPNRS AADAIQQCFK CLCKKGAAQW VLEGDIKACF DKIGHQWLLD NVPTDKRMLK QWLECGYIDK GLFYKTAEGT PQGGIISPTL MLLTLVGLEK LIKSIARKTG SRVNFIGYAD DFVITGSSKE VLVNDIKPQL MAFLQERGLA LSEEKTHVTH INDGFDFLGF NARKHKGKLL IKPSKSNVLS FLRNMRDLIR KHATIPVADL IKMMNPKLRG WANYYRHCVA KQTFGYVGHQ MFLALWRWSV RRHPNKGRKW IAHKYFLNYQ GQWIFHGWFK KDGLYGVIRL FQIGQVPIKR HVKIMSQATP FDPFWEGFLN ERKVKNTGRN SWFAPVATAL
|
| |