Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06739 |
Symbol | emrD |
ID | 5558622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 1871641 |
End bp | 1872846 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640911207 |
Product | multidrug resistance protein D |
Protein accession | YP_001448849 |
Protein GI | 156977943 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGCCT CGTTTCCATT AGCGAAACTT ACCTTTTTAA TCGCAATTCT GACTGCCGTA GGTCAAATGA CTCAAACGAT GTACGTGCCT TCTATTGGTC ATATGGCGGG TGAGTTCTTG GTATCAGCGT CGTCACTTCA AGCTGTGATG GCGTGTTACC TGATCCCTTA CGGTCTTTCG CAGTTTGTGT ACGGCACACT GTCTGATCGC CTTGGTCGCA AACCAATCAT CGTTGCGGGT TTGATCATTT ATATTCTTGG TACTTTGGTG GCGCTATTTG CTCATGAGTA CGAATGGTTC CTAGCCGGTA GCTTTATCCA AGGTTTGGGT ATCGGTTGTG GCGGTGCGAT GTCTCGCACA CTGACTCGTG ACTGTTTTGA AGGCGCAGAA CTGCACCGTG CAAACAGCTT GATCAGCATG TGTGTAATTT TCTCGCCATT GATGGCCCCT GTACTAGGCG GTTACCTAAC TGAAGCTTTC GGTTGGCGCT CTAGCTACTT ATTCCTTGCT CTGTTTGGTA TCGCAGTAAT GATCACCATG ATGACAAGCA TGATGGAAAC TTTGCCGAAA GAGCGTCGCA AACATGAATC TGTGGCGAAG AGCTACAAGT TCGTGCTTTC AGACAAACGC TTCCAAGGCT TCTTATTGGT GTTGGTTGCT ACGTTCGCAG GCGTTGCAGT ATTTGAAGCT GCAGCTGGTG TACTACTGGG CGGCGTGCTT GGCTTGCCAG CAACCACAGT AAGCTTACTG TTTGTCTTGC CGATTCCGGG TTACTTAGTC GGCGCTGGTC TATCGAGCTA CATCGCACAA CGCCGTTCTG AGCGACGTGC TCTAAACGTT GGTCTAGTCG CTATCTTAGT TGGCTCAGCA GTGGTATTGA TTCCGGGTCT GTTTGGTCTA ACAACGGCGT TGACTCTGAT TGGCGGTGCA ACCATTTACT TCTTGGGTGC GGGTATTTTG TTCCCAGCGG CAACAACAGG TGCACTTTCA CCGTTCCCAT ACCACGCGGG CACTGGCGGT GCGATTTTAG GTGGCATGCA AAACCTAGGT GCGGGTATCG CGACGCTGTT GGCTTCGTTC TTCCCGGCAC AAGACCAAAT GCCGCTAGGT TGTTTGATGA TGGCAATGTC GATCATCGCC ATGCTTGGTC TACGCTGGGT TAATCGCAAG CACGACCATT CAAACGAAAT GCCACTGGCG ATCTAA
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Protein sequence | MSASFPLAKL TFLIAILTAV GQMTQTMYVP SIGHMAGEFL VSASSLQAVM ACYLIPYGLS QFVYGTLSDR LGRKPIIVAG LIIYILGTLV ALFAHEYEWF LAGSFIQGLG IGCGGAMSRT LTRDCFEGAE LHRANSLISM CVIFSPLMAP VLGGYLTEAF GWRSSYLFLA LFGIAVMITM MTSMMETLPK ERRKHESVAK SYKFVLSDKR FQGFLLVLVA TFAGVAVFEA AAGVLLGGVL GLPATTVSLL FVLPIPGYLV GAGLSSYIAQ RRSERRALNV GLVAILVGSA VVLIPGLFGL TTALTLIGGA TIYFLGAGIL FPAATTGALS PFPYHAGTGG AILGGMQNLG AGIATLLASF FPAQDQMPLG CLMMAMSIIA MLGLRWVNRK HDHSNEMPLA I
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