Gene VIBHAR_06737 details

Gene Information

• Locus tag: VIBHAR_06737
• ID: 5558535
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009784
• Strand: +
• Start bp: 1868534
• End bp: 1870456
• Gene Length: 1923 bp
• Protein Length: 640 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640911205
• Product: arginine decarboxylase
• Protein accession: YP_001448847
• Protein GI: 156977941
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1166] Arginine decarboxylase (spermidine biosynthesis)
• TIGRFAM ID: [TIGR01273] arginine decarboxylase, biosynthetic

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGAATCG AGTTGGAAAA AGCAACTAAA TTAGACCGCA TCCGCGCGGA CTACAACGTT 
CACTACTGGA GCCAAGGCTT CTACGGAATT GATGACCAAG GCGAGGTATA CGTATCTCCT 
CGTAGTGACC ATGCACACCA AATCCCTTTC AGTGCGATTG TTAATGAGCT AGAAGCCAAG 
CAGCTGAACC TGCCTGTATT AGTGCGCTTC CCGCAAATCG TGCACCAACG CGTGCATGGC 
ATTTGCCAAG CTTTCAACCA AGCGATTGAA GAATACCAAT ATCCAAATAA ATACCTGCTG 
GTATACCCAA TTAAAGTAAA CCAACAGCGT GAAGTGGTTG ATGAGATCTT AGCGAGTCAA 
GCACAGCTAG AAAATAAACA GCTGGGTCTT GAAGCAGGCA GTAAGCCAGA GCTATTAGCC 
GTATTGGCAT TGGCTCAACA GGGCAGCTCC GTGATCGTGT GTAATGGCTA CAAAGACCGT 
GAATACGTGC GCCTTGCACT GATCGGTGAA AAGCTAGGCC ACAAAGTATT TATCGTACTA 
GAGAAGCTAT CTGAGCTTGA TCTGGTACTT GAAGAAGCAA AAAGCTTGGG CGTAACACCA 
CGTCTTGGTT TGCGTATCCG CCTTGCGTCT CAAGGTGCAG GTAAATGGCA AGCAAGCGGC 
GGTGAGAAAT CGAAGTTCGG TCTATCGGCA TCTCAAGTAT TGAGCGTGAT TGATCGTCTA 
AAATGCGAAG ACCAGCTGGA CACCATGCAA TTGGTTCACT TCCACCTTGG CTCACAGATG 
GCAAACATCC GTGACGTGCG TAATGGTGTA AACGAATCGG CACGTTTCTA CTGTGAATTA 
CGTGCCATGG GTGCAAACAT TGATTACTTC GATGTTGGCG GTGGTTTAGC AGTAGACTAC 
GACGGCACAC GTAGCCAATC TTCGAACTCG ATGAACTACG GGCTTGCAGA GTACGCGCGC 
AACATCGTGA ATACGGTAGG TGATGTGTGT CAGCAGTACG AACAACCGAT GCCAGTGATC 
ATCTCTGAAT CGGGGCGCTC TCTAGCGGCA CACCACGCGG TGCTGATTTC TAACGTTATT 
GGCACAGAAA CGTACCAACC AGAAGAAGTA TTCGAGCCAG CGGTAGATGC TCCGTTCTTG 
CTACAAAACA TGTGGCGAAA CTGGGAGAAC CTGCAAGATG GTACGGATGC GCGTGCATTA 
ATTGAAATTT ACAACGATAC CCAAAGCGAT TTGGCTGAGG TTCACTCACA ATTCGCTACT 
GGCGTACTGA ATCTTGAACA ACGTGCGTGG GCAGAACAAC TGTCGCTGCG CATTTACTTC 
GAGCTAAGTC GTCAAATGAG TACCAAGAAC CGTTTCCACC GTCCTATTTT GGATGAGTTG 
AGCGAACGTC TTGCGGACAA GTTCTTCGTG AACTTCTCTC TTTTCCAATC CCTGCCAGAT 
GCATGGGGTA TTGATCAGGT ATTCCCTGTT CTGCCTCTTT CTGGTCTTGG TGATGTGGAA 
GAGCGTCGTG CGGTGATGTT GGACATCACT TGTGACTCCG ATGGTGTGAT TGACCATTAC 
GTTGATGGCC AAGGTATCGA GAGCACACTA CCAGTACCAG CATGGAGCAA AGACAAACCG 
TACCTAATGG GCTTCTTCCT AGTAGGCGCA TACCAAGAGA TCCTTGGTGA CATGCACAAC 
CTATTTGGTG ATACCCACAG TGCAGTAGTC AATGTTGATG AAGAAGGTCA GTTTGAGATC 
AGCTACATCA ACGAAGGTGA TAGCGTAGAA GACATGATGC GCTACGTTCA TATCGACGTA 
GATGCGATTC GTGATAATTA CAAACAATTG GTTTCAGCAC GTGTTGAAGC CAGTGAACAA 
GAACAAATCC TAGCTGAACT AGAACAAGGT TTGGCAGGCT ACACCTATTT AGAGGACTTC 
TGA 

 

Protein sequence

MRIELEKATK LDRIRADYNV HYWSQGFYGI DDQGEVYVSP RSDHAHQIPF SAIVNELEAK 
QLNLPVLVRF PQIVHQRVHG ICQAFNQAIE EYQYPNKYLL VYPIKVNQQR EVVDEILASQ 
AQLENKQLGL EAGSKPELLA VLALAQQGSS VIVCNGYKDR EYVRLALIGE KLGHKVFIVL 
EKLSELDLVL EEAKSLGVTP RLGLRIRLAS QGAGKWQASG GEKSKFGLSA SQVLSVIDRL 
KCEDQLDTMQ LVHFHLGSQM ANIRDVRNGV NESARFYCEL RAMGANIDYF DVGGGLAVDY 
DGTRSQSSNS MNYGLAEYAR NIVNTVGDVC QQYEQPMPVI ISESGRSLAA HHAVLISNVI 
GTETYQPEEV FEPAVDAPFL LQNMWRNWEN LQDGTDARAL IEIYNDTQSD LAEVHSQFAT 
GVLNLEQRAW AEQLSLRIYF ELSRQMSTKN RFHRPILDEL SERLADKFFV NFSLFQSLPD 
AWGIDQVFPV LPLSGLGDVE ERRAVMLDIT CDSDGVIDHY VDGQGIESTL PVPAWSKDKP 
YLMGFFLVGA YQEILGDMHN LFGDTHSAVV NVDEEGQFEI SYINEGDSVE DMMRYVHIDV 
DAIRDNYKQL VSARVEASEQ EQILAELEQG LAGYTYLEDF