Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06624 |
Symbol | |
ID | 5557776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 1766806 |
End bp | 1768146 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640911097 |
Product | hypothetical protein |
Protein accession | YP_001448742 |
Protein GI | 156977836 |
COG category | [V] Defense mechanisms |
COG ID | [COG4452] Inner membrane protein involved in colicin E2 resistance |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA TCCTCAATAA CCAACTCGGC ACGAAGTTCG CCTTCGTGCT GTTTTTGTTT GTCTTATTGC AAATCCCGCT TTCAATGGTC ACAGGGCTGA TCTCAGAACG CTCATATCGC CAAGATGAAG TCAGAAATGA CATCGCACGC AGCAGCAGCG GCGAACAGCG CATCATTGGT CCATTCATCA TGGTTAACTA CACCGAAACC AGTTACCGAG ATGACAAAGT ACAGATTAAA GAGCGTCGTA AATTCCTCCT ACCCAGCACT TTTGATATGA GCGCGAATCT GGACAGCTTT GAAAAGTACC GAGGCATTTA CCGCGCGCGT TTATACAAAA CACAAGTGGC ACTGAAAGGC ACTTTTGATG CAGACGATCT CGCGGCGTTG CAGGGGCTTG ATATTGACAA CATGAGCCTA GTGGTTGGCA TTGAAGACAG CCGCGGATTA GTTCGTTTGG ATGACATGAC CATAGCGAGC TCTGAAATCG AAGTCGCACC GGGAACGGGG TTAAATCTGT TACCACAAGG CTTCCACAGT GATCTGACAC TTGCAAACCT AAACCCAGCA CAACCTTTGG CTTTCGATCT TAACTTCTTG CTGCAAGGGA TGGGTCAGCT TCAAGTCACA CCAATCGGCA GTCAGACAAC GGTTGAACTC TCTTCAACTT GGGCACATCC AAGCTTTATC GGTGATTACT TACCAGTGTC GTCAGAGGTA TCTGAAGATG GATTTAACGC ACAATGGGCG AGCAACAACT TCTCTACCAA TATCGCGCAG CTGTTCCAAA GCTGTTTGTC ATCGAATCAC GCTTGTCACG AGCTTGAACA GCGACAAATG GGCGTAGATT TGATTGATCC CGTGGACCAC TATTTGAAAT CTCATAGAGC TGTGAACTAT TCACTGTTGG TTATCACATT AGTATTTGCG AGTTTCTTCT TACTGGAGCT GTTCCAAGCG CGTCCGGTGC ACCCAGTGCA ATACGGCTTT ATTGGTCTGG CTTTAGCACT TTTCTATCTG TTGCTGATTT CGATGAGTGA ACATCTGGGT TTTAACTGGG CGTATGTGGT GTCAGCAGTC GCATCGACGG GGCTTTTAAG TGTGTACGTG AGCGGTATGT TGAGCAACAC CAAGCACTGC GCGATATTCG GAGCGTGTTT ACTTACTCTC TACGGATTAC TGTTTGGCTT GCTACAAGCA GAAAGCTACG CATTGGTTAT GGGAACATTG CTGTGTTTCG CGATTTTGAG CTTCACTATG GTTATTACAC GCAACATCGA CTGGTACGCA CGAAATAAGA AAGCAGAAGA AAGTGCAAAG GCGAATCATG AAGATGTTTA A
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Protein sequence | MKKILNNQLG TKFAFVLFLF VLLQIPLSMV TGLISERSYR QDEVRNDIAR SSSGEQRIIG PFIMVNYTET SYRDDKVQIK ERRKFLLPST FDMSANLDSF EKYRGIYRAR LYKTQVALKG TFDADDLAAL QGLDIDNMSL VVGIEDSRGL VRLDDMTIAS SEIEVAPGTG LNLLPQGFHS DLTLANLNPA QPLAFDLNFL LQGMGQLQVT PIGSQTTVEL SSTWAHPSFI GDYLPVSSEV SEDGFNAQWA SNNFSTNIAQ LFQSCLSSNH ACHELEQRQM GVDLIDPVDH YLKSHRAVNY SLLVITLVFA SFFLLELFQA RPVHPVQYGF IGLALALFYL LLISMSEHLG FNWAYVVSAV ASTGLLSVYV SGMLSNTKHC AIFGACLLTL YGLLFGLLQA ESYALVMGTL LCFAILSFTM VITRNIDWYA RNKKAEESAK ANHEDV
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