Gene VIBHAR_06624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06624 
Symbol 
ID5557776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1766806 
End bp1768146 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content47% 
IMG OID640911097 
Producthypothetical protein 
Protein accessionYP_001448742 
Protein GI156977836 
COG category[V] Defense mechanisms 
COG ID[COG4452] Inner membrane protein involved in colicin E2 resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA TCCTCAATAA CCAACTCGGC ACGAAGTTCG CCTTCGTGCT GTTTTTGTTT 
GTCTTATTGC AAATCCCGCT TTCAATGGTC ACAGGGCTGA TCTCAGAACG CTCATATCGC
CAAGATGAAG TCAGAAATGA CATCGCACGC AGCAGCAGCG GCGAACAGCG CATCATTGGT
CCATTCATCA TGGTTAACTA CACCGAAACC AGTTACCGAG ATGACAAAGT ACAGATTAAA
GAGCGTCGTA AATTCCTCCT ACCCAGCACT TTTGATATGA GCGCGAATCT GGACAGCTTT
GAAAAGTACC GAGGCATTTA CCGCGCGCGT TTATACAAAA CACAAGTGGC ACTGAAAGGC
ACTTTTGATG CAGACGATCT CGCGGCGTTG CAGGGGCTTG ATATTGACAA CATGAGCCTA
GTGGTTGGCA TTGAAGACAG CCGCGGATTA GTTCGTTTGG ATGACATGAC CATAGCGAGC
TCTGAAATCG AAGTCGCACC GGGAACGGGG TTAAATCTGT TACCACAAGG CTTCCACAGT
GATCTGACAC TTGCAAACCT AAACCCAGCA CAACCTTTGG CTTTCGATCT TAACTTCTTG
CTGCAAGGGA TGGGTCAGCT TCAAGTCACA CCAATCGGCA GTCAGACAAC GGTTGAACTC
TCTTCAACTT GGGCACATCC AAGCTTTATC GGTGATTACT TACCAGTGTC GTCAGAGGTA
TCTGAAGATG GATTTAACGC ACAATGGGCG AGCAACAACT TCTCTACCAA TATCGCGCAG
CTGTTCCAAA GCTGTTTGTC ATCGAATCAC GCTTGTCACG AGCTTGAACA GCGACAAATG
GGCGTAGATT TGATTGATCC CGTGGACCAC TATTTGAAAT CTCATAGAGC TGTGAACTAT
TCACTGTTGG TTATCACATT AGTATTTGCG AGTTTCTTCT TACTGGAGCT GTTCCAAGCG
CGTCCGGTGC ACCCAGTGCA ATACGGCTTT ATTGGTCTGG CTTTAGCACT TTTCTATCTG
TTGCTGATTT CGATGAGTGA ACATCTGGGT TTTAACTGGG CGTATGTGGT GTCAGCAGTC
GCATCGACGG GGCTTTTAAG TGTGTACGTG AGCGGTATGT TGAGCAACAC CAAGCACTGC
GCGATATTCG GAGCGTGTTT ACTTACTCTC TACGGATTAC TGTTTGGCTT GCTACAAGCA
GAAAGCTACG CATTGGTTAT GGGAACATTG CTGTGTTTCG CGATTTTGAG CTTCACTATG
GTTATTACAC GCAACATCGA CTGGTACGCA CGAAATAAGA AAGCAGAAGA AAGTGCAAAG
GCGAATCATG AAGATGTTTA A
 
Protein sequence
MKKILNNQLG TKFAFVLFLF VLLQIPLSMV TGLISERSYR QDEVRNDIAR SSSGEQRIIG 
PFIMVNYTET SYRDDKVQIK ERRKFLLPST FDMSANLDSF EKYRGIYRAR LYKTQVALKG
TFDADDLAAL QGLDIDNMSL VVGIEDSRGL VRLDDMTIAS SEIEVAPGTG LNLLPQGFHS
DLTLANLNPA QPLAFDLNFL LQGMGQLQVT PIGSQTTVEL SSTWAHPSFI GDYLPVSSEV
SEDGFNAQWA SNNFSTNIAQ LFQSCLSSNH ACHELEQRQM GVDLIDPVDH YLKSHRAVNY
SLLVITLVFA SFFLLELFQA RPVHPVQYGF IGLALALFYL LLISMSEHLG FNWAYVVSAV
ASTGLLSVYV SGMLSNTKHC AIFGACLLTL YGLLFGLLQA ESYALVMGTL LCFAILSFTM
VITRNIDWYA RNKKAEESAK ANHEDV