Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06570 |
Symbol | |
ID | 5556683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 1719638 |
End bp | 1720729 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640911043 |
Product | ABC amino acid transporter periplasmic ligand binding protein |
Protein accession | YP_001448688 |
Protein GI | 156977782 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAACG TATTCAAATT GACACTTCAA CACTTTGTCA CTTCCGCACT TTTCGTTACT TTCTTATTTA GCTCAGCCTC CTTCGCTACC CCTCTCAAAG TCGGCACTTA TCCCTGTCCT CCCTTTGTTA TTCATTCGAC TGGTGAAGAA TTTAACGGCC TGAGCGTTGA GCTATGGGAG CAAATTGCCA AAAACATGGG AGTAGAGTTT CAGCTTGAAA ATCATCCTCT CGACGATCTC CTCAGTGCGA TTGAAACTGG CCAAGTCGAT ATTGGCGTCT CCTGTATATC GATCACACCA GAGCGAGAGT TATTTGCCGA TTTTTCTCAC TCCTTTTATG AAACACACCT CGCCATCGCG GTTAAGCGTC AAGGCTACCT ACATACCTTA AAATCAATAT TCTTGAACCC TGCGTTATGG CTGATCATTG GGGCAATTGT ATTGATAGCA GGCTTAGTCG GCGCTTTTTT CTACATCATA GAGAAAGGAA AGAATGAAAA GCTGTATTCA ATGAACAGTC GAATCGGTCG CTGGGTTGAG AGCTTTATAC TTGGCTTACT GTTTATCACT CGCGGCCCGT TCAATTATTT TGAGTTTAAG AGCCTGACTG GGCGTATCGT CACTGTTCTA ATCGGTGTAC TTAGCATGCT CTTCATCGCA AGTATTACCG CTGTTTTAGC CAGTAAGCTC ACGCTCAGCC AAGGATATTC TCAAATCAAA GGCGTCAATG ACCTTGCCAA AGTTCAAGTT GGCGCCAAAG GAGCAACAAC CTCTTCACTC ATGCTCACCA GTTTTGGTAT TCGATACAAA AGCTACGACG ACATGACAAC CTTGCTGGAA GCATTGGAAA ATGGGGAAGT TGAAGCAATT GTCGCCGATG ATGTCGTCCT AAAGTACATG ATTGGTAACG GCAGACAGAG CGGACAATTT GAAAACCTTG AAGTGTTACC TTACCAATTG GAAAAACAAA ACTACGGTTT CATCATGACC GAAAACAACC AATATGAGGA AGAGATCAAT CGCGCATTAT TGCAGATTAG AGAGTCGAGA GAGTGGCGCA AAACCTTAAT CGACTATTTT GTCGAGAAGT AA
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Protein sequence | MQNVFKLTLQ HFVTSALFVT FLFSSASFAT PLKVGTYPCP PFVIHSTGEE FNGLSVELWE QIAKNMGVEF QLENHPLDDL LSAIETGQVD IGVSCISITP ERELFADFSH SFYETHLAIA VKRQGYLHTL KSIFLNPALW LIIGAIVLIA GLVGAFFYII EKGKNEKLYS MNSRIGRWVE SFILGLLFIT RGPFNYFEFK SLTGRIVTVL IGVLSMLFIA SITAVLASKL TLSQGYSQIK GVNDLAKVQV GAKGATTSSL MLTSFGIRYK SYDDMTTLLE ALENGEVEAI VADDVVLKYM IGNGRQSGQF ENLEVLPYQL EKQNYGFIMT ENNQYEEEIN RALLQIRESR EWRKTLIDYF VEK
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