| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_06446 |
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| Symbol | |
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| ID | 5557199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | - |
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| Start bp | 1600648 |
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| End bp | 1603527 |
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| Gene Length | 2880 bp |
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| Protein Length | 959 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640910919 |
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| Product | hypothetical protein |
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| Protein accession | YP_001448564 |
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| Protein GI | 156977658 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATAAAG GAAACACTAA CATGTCAAAA AAGCTAGATT TAGTTAGGGA TGTAATTAGC
GCAAATCAAC ATACGAATGA TATTAACAAA CTGGATAGTG AGTTGATGTC CCTTTGTGAT
GATGCAATGA GCAACCCTAC AATAGATAAC CTTAATAAAG TTCGAGATAA AATTGAACAA
AGAAAAGAAA CGGAACAACT TAGAGGAACT GACGCATTTG GAGCCTTAGG TTTGTTAGGA
GAGCTTCTTG ATAGTTTTAT AGGTGAAATG GTCGACAAAG GTGATGCAAT ACAAGATCAC
TGGGAGCCTG CCATTTTTGA TGACATTGAA GAGTATATGC AAGGAGATAA GGCTAGGAGA
AATGAGCTAA AAGAACTGTG TAATAAAGAT GGCAAGCATT TGCAAGGACC GCGGCTTAGG
GAATTGCCTA AATCTCCAAC CGCTCCTGGC TCCCCTTTAA TCCTTGACCT TGATGGTGAT
GGAATTGAAA CAACAGACTT GGAAAGTGGG GTGTACTTTG ATCACGACGG TGATGGAAAG
CGGGAGCGTT CTGCTTTTGT AGGGCCAGAT GATGGGCTGT TAGTACTCGA TGTAGATGGA
GATGGAGCTA TTACATCCGG CAATGAGTTG TTTGGCAATA ATACAAAATT GGGAGACGGT
ACATTTGCCA GCAATGGTTT TACAGCATTG AGCCAATACG ACGAAAATGG CGATGGCCTG
ATCGACAGCA AAGACCCTAT TTTCAGCCAG TTAAAGGTTT TCAGGGACTT AAACCAAGAT
GGTATTAGTC AGAGTGAAGA ACTACGTTCA CTGAACCACC ATGGTGTCAC ATCACTCAAG
GTTACCTATA ACGATTCGCC ATATGTGGAT GAAAATGGGA ATGAGCACCG GCAACAGTCG
TCATACACTA AATCAGATGG ACGCAAAAAT GATTTAAACG ATGTTTGGTT TCAAATGGAA
AAGTCAGACT TTATATATCC AGAAATCGAC ATTCCTAAAG ATATTCTTAA ACTTCCAAAC
ATTAACGGTA TCGGGTCTCT TCCTTCTCTA CATTATGCTA TGGCAAAGGA TGGATCGGGT
CGCCTTAAGT CATTGATAGA GAGCTATCAA GCAGGTACTA CAGATCAATC TTCTGCAGAG
TTGCTGACTG AAATTATGTT TACATGGGCG GGAGTAACAG GTGACTATTC ACCATATTAT
CAAAGCAAGA TTGATGCACG CAAGATACGT ACATTGGAAG CATTTTATGG TTACAAAATC
GATAAGCCTC GTGGGTCAGG CGTTCAGTAC ACAGCGCTCT TTAGCGGGAT TTTTAAAAAT
CTAAGCAGAG AGATTGGCCT TAGATTAAGT GGGACCGAAT CAATTTTGTT TCGAGAGGTA
AAGTGGATCC AAGAGGAAAA AACGGGTAAC TGGTATGGCG ATTTCTCTGA AGTTGCAGAT
AAAGTCATCG AGCTTGTGTC GAAAGGGACT GCAGGAGCTT GGAAAGAGAC CATCCATTTT
TTTAACACAC TTAAGTTAAG TGACGATGAG TATTCTACGA ACCAAAAAAA TCTCTACTCC
TACCTTTTTG AGTCCGCTCA CTCTTCTACG GCCGATAATT TACCTGAAGG TTTCGACAAG
TTAATCCATA TGTCGATTTC ACAAGAGAGC AGAGTTGGAG ATGAGTTTGA CAATGATCTG
TTTGGATCGA GTTCCGATGA TTTTGTCTAC GGTAACAAGG GAGATGACTC GATTACAGTA
GGCGCCGGCA ACGACTTTGT TTATGGAGGT GAGGGCAACG ATACATTGCA TGGTGGCACG
GGCAACGACC GAGTGTCAGG CGGTGAGGGC GACGATCACC TGACGGTCGC TTACAGTGGC
AGCAACACCC TTGATGGTGG CGCGGGTGAT GACGTTCTGA CGGTCGAAAC ACCGACGAGC
TCAGGTCGTT ACAGTAGCTA CTATAAAACA GCCAACAATG CCCGTAACAC CTTAATCGGT
GGGGCGGGCA ATGACCGCCT AGTGGGCGGC CTCGGGGCGG AGCGCTACGA GTTCAATCGC
GGGGATGGTC AGGACACCAT CCGTGACAGA GACGTGTACG GCAGCAGTGT TGACCAAATT
GTGTTTGGTG AGGGCATCGT CCGTGACGAG TTGAGTCTGC GCCGTGAAGG GAACCATCTG
GTCATCATGG TAGGTGGGCC GGACTCGGGT GACTCGATCA CCATTGAAGA AGGGTACGTC
AACAGTCAGC ATCAAATCGA AGAGATTGTG TTGTCGGATG GCAGTACGGT TTCGCCTCAG
TCGTTGCCAA TCTTAAGCAG CGCCGAAGCG GATGAGCTGA GAGGTGGGTA CTTTGCGGAT
GTGATTGATG GCCGCGAAGG CGATGACCGC CTCTATGGTG AAGGGGGCGA CGACACGTTA
GAAGGCGGTC AAGGAGATGA TGTGCTCGAT GGGGGCGCAG GCAATGACAC GTTGAACGCG
GGGGCTGGCA ATGACACCGT CACGGCAGGC GCAGGTAATG ATGTGGTTGC AGGCGGTCTC
GGTAACGATA CGTTGCATGG CGGCACGGGC AACGACCAAG TGTCCGGCGG TGAGGGCGAC
GATCACCTGA CGGTCGCTTA CAGTGGCAGT AATACCTTAG ACGGTGGCGC GGGTGATGAC
GTTCTGACGG TCGAAACACC GACGAGCTCA GGTCGTTACA GTAGCTACTA TAAAACAGCC
AACAATGCCC GTAACACCTT AATCGGTGGG GCGGGCAATG ACCGCCTAGT GGGCGGCCTC
GGGGCGGAGC GCTACGAGTT CAATCGCGGG GATGGTCAGG ACACCATCGT GACAGAGACG
TGTACGGCAG CAGTGTTGAC CAAATTGTGT TTGGTGAGGG CATCGTCCGT GACGAGTTGA
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| Protein sequence | MNKGNTNMSK KLDLVRDVIS ANQHTNDINK LDSELMSLCD DAMSNPTIDN LNKVRDKIEQ
RKETEQLRGT DAFGALGLLG ELLDSFIGEM VDKGDAIQDH WEPAIFDDIE EYMQGDKARR
NELKELCNKD GKHLQGPRLR ELPKSPTAPG SPLILDLDGD GIETTDLESG VYFDHDGDGK
RERSAFVGPD DGLLVLDVDG DGAITSGNEL FGNNTKLGDG TFASNGFTAL SQYDENGDGL
IDSKDPIFSQ LKVFRDLNQD GISQSEELRS LNHHGVTSLK VTYNDSPYVD ENGNEHRQQS
SYTKSDGRKN DLNDVWFQME KSDFIYPEID IPKDILKLPN INGIGSLPSL HYAMAKDGSG
RLKSLIESYQ AGTTDQSSAE LLTEIMFTWA GVTGDYSPYY QSKIDARKIR TLEAFYGYKI
DKPRGSGVQY TALFSGIFKN LSREIGLRLS GTESILFREV KWIQEEKTGN WYGDFSEVAD
KVIELVSKGT AGAWKETIHF FNTLKLSDDE YSTNQKNLYS YLFESAHSST ADNLPEGFDK
LIHMSISQES RVGDEFDNDL FGSSSDDFVY GNKGDDSITV GAGNDFVYGG EGNDTLHGGT
GNDRVSGGEG DDHLTVAYSG SNTLDGGAGD DVLTVETPTS SGRYSSYYKT ANNARNTLIG
GAGNDRLVGG LGAERYEFNR GDGQDTIRDR DVYGSSVDQI VFGEGIVRDE LSLRREGNHL
VIMVGGPDSG DSITIEEGYV NSQHQIEEIV LSDGSTVSPQ SLPILSSAEA DELRGGYFAD
VIDGREGDDR LYGEGGDDTL EGGQGDDVLD GGAGNDTLNA GAGNDTVTAG AGNDVVAGGL
GNDTLHGGTG NDQVSGGEGD DHLTVAYSGS NTLDGGAGDD VLTVETPTSS GRYSSYYKTA
NNARNTLIGG AGNDRLVGGL GAERYEFNRG DGQDTIVTET CTAAVLTKLC LVRASSVTS
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