| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_06399 |
|---|
| Symbol | |
|---|
| ID | 5557503 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009784 |
|---|
| Strand | + |
|---|
| Start bp | 1567711 |
|---|
| End bp | 1568868 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640910872 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001448517 |
|---|
| Protein GI | 156977611 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACGT TAACTCTTTC AAATATCGCT AAATGTTATC CGAACGGCTA TCAGGCGATC
CAAAAACTCA ATCTTGATAT CTGCGACGGT GAAATGGTCG TGCTGGTTGG CCCAAGTGGC
TGCGGTAAAT CCACCCTACT TCGCATGATT GCAGGTTTAG AAGAAATCAG CTCTGGTGAG
CTCAAGATCG ACACCACTAT CGTCAATGAT CTCGAACCTG GCGAGCGCGA CATTGCCATG
GTTTTCCAGA ACTACGCCTT GTACCCACAC ATGACGGTGT ACAACAACAT GGCCTATGGT
CTGCGCAACC GCAAAACACC GAAAGCGGAA ATCGAACGAT TGGTTCACGA AGCAGCAAAG
ATGCTGGAGC TGGATCACCT ACTCGACCGT AAACCGGGAC AGCTTTCTGG CGGACAACGT
CAACGTGTCG CGATGGGACG CGCAATTGTG CGTGAACCAA AGGTATTCTT GTTTGACGAG
CCTCTGTCTA ACCTAGACGC AAAACTGCGT GTTCAAATGC GTTTAGAAAT TAAGAAGCTG
CAACGTCGCC TTGGTACCAC GTCAGTTTAC GTTACTCACG ACCAAGTGGA AGCAATGACG
CTTGCAGACA AGCTTGTTGT CTTGAACAAA GGCAATGTCG AACAAGTTGG TACACCGCTA
GAGATTTACG ATAACCCTGC TTCTCTGTTC GTCGCGACCT TTATTGGCTC ACCATCCATG
AACATCTTAG ATGGCAATGT TAGCGTTGAC GGTATCACTA TCGGTGACGC GCTGCTTCCT
GCATCCACGA CAAACTTGGA TTTGGATGAA GTTAAACTGG GTCTTCGTCC AGAGCATTTA
CAAATCAGCC AACATAACCC ATGGTTGCAG GTAGAAGTCG AATTGATTGA ATCGCTCGGT
GCTGACTTGC TGCTTTACTG CCGCACAGAA GGCGATGATT CACAAAAGCT GGTTGTTCGT
GTTGAGGGAC ATACGCCAAT TCAAATTGGC GATAAACTTG GTCTGGATAT CAAACCAAAG
CATGTTCACC TTTTTGATGC CAACACAGAA AAACGCATCG AGTGTACACT GGCCCCAGCG
GAATCATTGC AAGACGTCAG TGACGAAACC CAAGCAATAA ATCCTCAAGT AAACAATCAA
GGAGTGGTGA ATGCCTAA
|
|---|
| Protein sequence | MSTLTLSNIA KCYPNGYQAI QKLNLDICDG EMVVLVGPSG CGKSTLLRMI AGLEEISSGE
LKIDTTIVND LEPGERDIAM VFQNYALYPH MTVYNNMAYG LRNRKTPKAE IERLVHEAAK
MLELDHLLDR KPGQLSGGQR QRVAMGRAIV REPKVFLFDE PLSNLDAKLR VQMRLEIKKL
QRRLGTTSVY VTHDQVEAMT LADKLVVLNK GNVEQVGTPL EIYDNPASLF VATFIGSPSM
NILDGNVSVD GITIGDALLP ASTTNLDLDE VKLGLRPEHL QISQHNPWLQ VEVELIESLG
ADLLLYCRTE GDDSQKLVVR VEGHTPIQIG DKLGLDIKPK HVHLFDANTE KRIECTLAPA
ESLQDVSDET QAINPQVNNQ GVVNA
|
|---|
| |