Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06386 |
Symbol | |
ID | 5557667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 1555088 |
End bp | 1557280 |
Gene Length | 2193 bp |
Protein Length | 730 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640910859 |
Product | peptidase |
Protein accession | YP_001448504 |
Protein GI | 156977598 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1505] Serine proteases of the peptidase family S9A |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCATTACA CAAAACAAAA ACAGAAAAGG AAGTCTATGA AAAAGAAAAC CTTAGCATTG GTCACGGCGT TTGCGATGAA GGGAATGTTA CCGAGTGCGT ATGCAGAAGA CTCAACACAA AAGTTGGTTG AACACGTACA CAAAATGGCG GTGAAGTACC CAACGACAAA GAAAGTCTCT GTGGAAGATG AGTATTTTGG TACCAAAGTT AGTGACCCGT ACCGCTGGTT GGAGGACGAC CGCAGCAAAG AAACCGCAGA TTGGGTCAAA GCGCAGAACC AAGTCACGTT CGATTACTTG GCGCAAATTC CTTATCGTCA CCAGATTGAA GAACGCTTAA CTCAGTTGAT GGATTACGAG AAGCTAGGGC GTCCATTCAA AGAAGGCAAA TACACCTATT TCTATAAGAA CGACGGTTTG CAAAACCAAG ATGTGCTTTA CCGTCAACTC GATGATGGCA AGCCTGAAGT CTTCCTCGAC CCAAATACTT TTAGTGAAGA TGGCACAACT TCGCTGGCGA ACGTGAGTTT CACCAAAGAT GGTTCTTTAG TCGCTTACAG CATTTCAGAA AGCGGTAGCG ATTGGCGCAA AGTGATTGTG CTTGATGCCG AAACCAAAAA GCCTGTCGGT GAGACGCTGG TGGATATTAA GTTCAGCAGC GTAAATTGGC TGGGTAATAA AGGTTTCTAC TACTCAAGTT ACGACAAGCC AGAGGGCAGC GAACTTTCGG CAAAAACCGA CCAACACAAG CTTTATTACC ATGAGCTAGG CACTAAGCAG AGTGAAGACA AGCTTATCTT CGGTGGTACA GATACTGAGA AGCACCGATA TGTTCGCGGT TACACTTCCG ATGACCAACG TTACCTGTTT ATTTCGGCAA ACACTTCAAC GTCTGGCAAT AAACTGTTCA TGAAAGATTT GACCAAGCCA GACAGTCCGC TGCAAACCAT TTTGGATGAC ACCAATTCTG ATACTTGGGT GATTGATAGC AAAGGCACTA AGCTGTATTT GGTCACTAAC TTAGATGCGC CAAACAAACG TGTAGTGACG GTGGATGCGA GTAACCCAGA GCCGAACAAT TGGAAAGATC TAATCCCTGA AACTGACAAC GTGCTTAGCC CATCAACAGC GGGCGGTTAC CTGTTCGCAA GCTACATTGT TGACGCGCTT TCGATGGTCA AACAATACGA TATGGACGGT AAGTTCATTC GTGAAATCAA GCTGCCAGAC ATCGGCAGTG CTTACGGTTT TTGGGGTAAG AAAGAAGACT CGGAAGTCTA CTACTCTTTC ACCAACTACA AGACGCCAAG CACGACCTAT CGCTTAGACA TCAAAGAGGG TGACAGCGAG GTTTACCACA AATCGAACGC ACCATTCGAT CCGGCACAAT TTGAATCTCG TCAGGTGTTC TACAAATCGA AAGATGGCAC CAAGATTCCA ATGATCATCA CCTACAAAAA AGGCACGCCG ATGGACGGCA CTGCGCCAAC GATCTTGTAT GGTTATGGTG GTTTCAATAT CAGCCTGACG CCTTACTTTA GTCCGAGTCG AGCAGCATGG TTGGAAATGG GCGGTATTTA CGCTGTCGCG AACATCCGTG GTGGTGGTGA GTACGGTAAA GAGTGGCACA ATGCTGGCAC CAAGTTAGAG AAACAAAACT CGTTTGATGA CTTTATTGCC GGAGCTGAGT TCCTTATCGA TAAAGACTAC ACCTCATCAG ACAAGCTTGC GATTAATGGT GGCTCGAACG GCGGCTTGCT CGTCGGGGCA GTGATGACGC AGCGCCCAGA GCTGTTTAAA GTGGCACTGC CGGCAGTTGG TGTATTGGAT ATGCTTCGCT ACCACACCTT TACGGCAGGA GCGGGCTGGG CTTATGACTA TGGTACAGCA GAGCAAAGTA AAGAGATGTT CGATTACCTC AAAGGTTACT CGCCAGTACA CAACGTTAAA GCGGGTGTTA AGTACCCTGC AACTATGGTA ACAACGGGAG ACCACGATGA CCGTGTGGTA CCTGCACACT CGTACAAATT TGCGGCTGAG CTACAGTCTA AGCAAGCAGG CACGAACCCA ACTTTGATTC GAATCGAAAC CAATGCAGGT CATGGTGCAG GCACACCGAC TAGTAAGGTT ATCGAGAAAA CCGCGGATGT TTACAGCTTC ACTTTGTTCA ATATGGGCGT CGAAAAGCTG TAA
|
Protein sequence | MHYTKQKQKR KSMKKKTLAL VTAFAMKGML PSAYAEDSTQ KLVEHVHKMA VKYPTTKKVS VEDEYFGTKV SDPYRWLEDD RSKETADWVK AQNQVTFDYL AQIPYRHQIE ERLTQLMDYE KLGRPFKEGK YTYFYKNDGL QNQDVLYRQL DDGKPEVFLD PNTFSEDGTT SLANVSFTKD GSLVAYSISE SGSDWRKVIV LDAETKKPVG ETLVDIKFSS VNWLGNKGFY YSSYDKPEGS ELSAKTDQHK LYYHELGTKQ SEDKLIFGGT DTEKHRYVRG YTSDDQRYLF ISANTSTSGN KLFMKDLTKP DSPLQTILDD TNSDTWVIDS KGTKLYLVTN LDAPNKRVVT VDASNPEPNN WKDLIPETDN VLSPSTAGGY LFASYIVDAL SMVKQYDMDG KFIREIKLPD IGSAYGFWGK KEDSEVYYSF TNYKTPSTTY RLDIKEGDSE VYHKSNAPFD PAQFESRQVF YKSKDGTKIP MIITYKKGTP MDGTAPTILY GYGGFNISLT PYFSPSRAAW LEMGGIYAVA NIRGGGEYGK EWHNAGTKLE KQNSFDDFIA GAEFLIDKDY TSSDKLAING GSNGGLLVGA VMTQRPELFK VALPAVGVLD MLRYHTFTAG AGWAYDYGTA EQSKEMFDYL KGYSPVHNVK AGVKYPATMV TTGDHDDRVV PAHSYKFAAE LQSKQAGTNP TLIRIETNAG HGAGTPTSKV IEKTADVYSF TLFNMGVEKL
|
| |