Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06357 |
Symbol | |
ID | 5557900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 1525477 |
End bp | 1526427 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640910830 |
Product | hypothetical protein |
Protein accession | YP_001448475 |
Protein GI | 156977569 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAGC GAATCATTCT TGGCACCTTA GCCCTGACTC TTTTAACTGC CTGTTCCAAA GATGACGGAC AGCAAGCCCT TGGCACACTA GAGCGTGACC GCGTAACCTT CACTGCAACC TCTAGCGAGA TAATTCGAGC CCTACCCATC AAGGAAGGCA GCCAAGTCAC CGAAGGAGAA GTGTTGGTTC AGCTCGATAC AAAGAACCAA GAAGCTGTTT TAGCTCACGC CTTAGCCGAA CAAGCAAAGG CTGACGCTTA TCTTTTGAAA TTGACCAATG GTGAGCGACC AGAAGACATT GCCGCAGCGC AAGCACGTGT TGCCAGAGCG GAAGCTCAAT TGGTTGAAGC ACAAAAGAAC TACCAACGTA AAGCGGAATT AGTTCGTAAA AAGCTCATCA GCCAATCAGA AAAAGACACC GCTTTAGCAG CCCGAGATTC TGCCCGTGCA GAGCTAGACT CCTCACAAGA AGAGTTCAGC AAACTGACCG CTGGCTCTCG CCCTGAAGAT ATTGAACAAG CGAAAGCCGC ACTCATGGTA GCAAAAGCTG ATGTAGCATT GCAAGACCAG AAACTGGCAG AACTCACCAT CACCGCCACG CGAGATGGCT TGTTAGATAA CCTACCGTTT AACCTTGGCG AACGCGTCCC TATCAATAGC GTGGTTGCTG TAATACAAGC TAGCCGCGTC CCATACGCTC GTGTTTATGT TCCTGCTAAC TATCGAGTCG ACTTTGTGCC GGGTAAAACG GTTAACGTGC ATGTAGATGG TGTTGAGCAA CCATATAGCG GCACCGTTCG TTGGGTAGCG ACTGAGCCTT CATTCACACC TTATTTCGCG CTCACCGAGG AAGAACGCTC GCGTTTGATG TACCTAGCAG AAGTCGACCT ACAAGACTCC GCACAATCCT TGCCTTCAGG TATCCCAGCG CAAGTGGATT TGGTGGAGTA A
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Protein sequence | MMKRIILGTL ALTLLTACSK DDGQQALGTL ERDRVTFTAT SSEIIRALPI KEGSQVTEGE VLVQLDTKNQ EAVLAHALAE QAKADAYLLK LTNGERPEDI AAAQARVARA EAQLVEAQKN YQRKAELVRK KLISQSEKDT ALAARDSARA ELDSSQEEFS KLTAGSRPED IEQAKAALMV AKADVALQDQ KLAELTITAT RDGLLDNLPF NLGERVPINS VVAVIQASRV PYARVYVPAN YRVDFVPGKT VNVHVDGVEQ PYSGTVRWVA TEPSFTPYFA LTEEERSRLM YLAEVDLQDS AQSLPSGIPA QVDLVE
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