Gene VIBHAR_06298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06298 
Symbol 
ID5558765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp1474987 
End bp1475940 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content45% 
IMG OID640910772 
ProductABC-type Fe3+-hydroxamate transport system periplasmic component 
Protein accessionYP_001448417 
Protein GI156977511 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTAA AATCAATCGC TTCCCATTTT TCTAAAGCAA AAAATTTGAA TACAAAACTC 
ACTCTGTCTG TTTTAGCTGG CACTTTATCA TTTAATGCGA TGGCGGATTA CCAAGTTGAA 
GATAGTGAAG GTGTTAAGAC TATTAAAGCT CAACCCGTTA GAGTGGCGGC ACTGAACTGG 
GATATAGCAG AGCAAGTGAT CGAACTAGGC GTAACACCGG TCGCGGTGCC TGATATTGCA 
GGGTACAGTG ATTGGGTTGT TCAACCTGCG ATTCCAGAAG GTGTGACGGA TATTGGCACT 
CGAACAGAGC CTAACTTTTC TGCACTTAAG AAGCTTAACC CTGATGTGAT CCTTATTGCT 
TCGCCTCAGA AAGATCTGCA AGAGCGATTC TCTGAAATCG CACCAGTACT CTATTACCAA 
ACTTATAGTG AGCAGCATAG CAACGCGGCG GCGGCTATCG AGAACTTTAA GAAGATAGCT 
CAATTGCTTG GCAAAGAAGA ACAAGCGAAC AATAAACTCG CTGCGATGGA TGCGCGTATT 
GCTGTTCTAA AGGCTGAGTT AGCCAAGGCG TATCCAGATG ACAAACCAAA AGTTACTTCA 
TTCCGTTTTG CTAGCACCAC TTCGGTATAC ATTTACGGTA ATAACTCGAT CCCGCAATAT 
GCGCTTGAGC AGTTAGGCTT TGAAAATGCA ATGGATCTTC CTGCGAGTCA GTGGGGTATC 
AGCCAAAAGC GTATGACTGA GCTTAAGAAG GTGAAGAATG GCATTGCGCT TTACTTCGAA 
CCTTTCCCAT ACCAAGACAA GCTGAATCGG TCCCCAATTT GGAAGAGTAT GCCTTTCGTG 
CGTAGTGGCC AATTTAGCCC AGTGGAGGCA AGTTGGAGCT ACGGCGGGGC GATGTCGATT 
TTGTATAATG CAGAAGCCAT GGCGCAATCA TTATTGGCTT TAGCGGAGCA GTAA
 
Protein sequence
MSLKSIASHF SKAKNLNTKL TLSVLAGTLS FNAMADYQVE DSEGVKTIKA QPVRVAALNW 
DIAEQVIELG VTPVAVPDIA GYSDWVVQPA IPEGVTDIGT RTEPNFSALK KLNPDVILIA 
SPQKDLQERF SEIAPVLYYQ TYSEQHSNAA AAIENFKKIA QLLGKEEQAN NKLAAMDARI 
AVLKAELAKA YPDDKPKVTS FRFASTTSVY IYGNNSIPQY ALEQLGFENA MDLPASQWGI 
SQKRMTELKK VKNGIALYFE PFPYQDKLNR SPIWKSMPFV RSGQFSPVEA SWSYGGAMSI 
LYNAEAMAQS LLALAEQ