Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06282 |
Symbol | |
ID | 5558672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 1461647 |
End bp | 1462261 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640910756 |
Product | 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase |
Protein accession | YP_001448401 |
Protein GI | 156977495 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTCA TTCAGGTTGA AGAGAAGAAA GTCAAAGTTG GTAAAGTTCT TTGTGTGGGG CGTAACTACG TAGAGCATAT TCAAGAGCTT AATAATGCCA TGCCAGAGCA AATGGTTGTT TTCAATAAAC CTGCGACTGC CGTTTCAACC AAACTCACCT CATTTCATCA AGAGCCTTTG CATTACGAAG CAGAGATCTG CTTTGTGATC AAAAATGGTC AATACAGTGC GGTAGGGCTC GGCTTAGATC TGACCAAACG TGGCTTACAA TCGACCCTAA AAGAAAAAGG ACTACCGTGG GAGCGTGCCA AAGCGTTCGA CGGTTCAGCG GTATTCAGTC GTTTCCATTC TCTTCAAGGT GTCGATATAG ACGATCTCAA CTTAGAGCTT TTGATTAACT GTGTTCATGT TCAAAAAGGG CACGTTAAAC AGATGCTTTA CCCACCTATG AATATTCTCG ATGAGTTGAA GAGTTATACA ACGCTAGAAG ATGGCGATGT TGTAATGACA GGCACACCAA AGGGCGTGGG AGAAGTGCAT CAAGGCGATG TCTTCCTTGG GCGTTTGAAG TGTGGAGACA TCACCTTATT AGAGATTGAA TGGTTAGCGG CTTAG
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Protein sequence | MSVIQVEEKK VKVGKVLCVG RNYVEHIQEL NNAMPEQMVV FNKPATAVST KLTSFHQEPL HYEAEICFVI KNGQYSAVGL GLDLTKRGLQ STLKEKGLPW ERAKAFDGSA VFSRFHSLQG VDIDDLNLEL LINCVHVQKG HVKQMLYPPM NILDELKSYT TLEDGDVVMT GTPKGVGEVH QGDVFLGRLK CGDITLLEIE WLAA
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