Gene VIBHAR_06262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06262 
Symbol 
ID5558730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp1445500 
End bp1446504 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content44% 
IMG OID640910736 
Producthypothetical protein 
Protein accessionYP_001448381 
Protein GI156977475 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATCAA TACAAGGAAA CACTATGAAA AAAGTAGCAA TTGCAGTAGC AGCAGTGGTA 
GCTGGTGGTT TAATTAACTC TGCTCAAGCT GAAATGTATA TCGGGGGCAA AGTGGGCATG 
ACTACTTTAG ATGATGCTTG CTATTTAAAC AGCCCTTGTG ATGATGATGC TTTCGGTGCC 
GGAATGCACA TCGGTTACGA TTTTACCGAT ATCATTGGTC TTGAGTATGG CGTTGATTAC 
TTAGGTGACT ACAAAGCTAA CTTCAAGTCA GGGGCTAATA CAGTTGATAC GATTGATGGC 
GACCTTTGGG CACTAACTCT TGCACCTAAA TTTAACTGGC ATCTAAACGA TACGTGGAAC 
CTATTCGCGA AAATCGGTGG TGCTTACATG ATTTCTGGTG ATGAGAAAGA CCTTGTACCA 
ACGGGTTCAT TAGGTGCCGA GTACACTATC GACAGAAACT GGAGCGTTCG TGGTGAATAC 
CAACGTTACC AAGGTATGTC TGATAATGTG ATAGATGACA TGGATGCAAA CTTCTTCGGT 
ATCGGTGTTA ATTACAAATT CGCGGCAGCG CCAGTTGTAG CTGCAATCGT AACAGAAGAG 
GTTCTTGAAG AAGAGCCTGT TTTATTAACG AAGACGCACA AAGAAGAGTA CGGTTCAGGC 
ACATTTGAAT TCGACAGTGC GAAACTAACT GACTCAGTAT CTGAGCGTCT AGACAACTTC 
GTTAACTTCT TGAACGAATA CCCACAAGCT CAAGTTGAGA TTACAGGTTA CACGGATAGC 
TCTGGTCCAG CAGCTTACAA CCTAAAACTG TCTGAGCGCC GTGCACAAGC TGTTGCAGAT 
TACCTAATCG CAGCAGGTAT CGATGCGGAC CGTTTCACGG TTACAGGTAT GGGTGAAGAA 
GATCCAGTTG CTGACAACAG CACTCACGAA GGTCGCGAGC AGAACCGTCG TGTTGTGGTA 
CATGTACCTG AGTTCCAATA CGAAGAACTT GTACAACCAG AATAA
 
Protein sequence
MQSIQGNTMK KVAIAVAAVV AGGLINSAQA EMYIGGKVGM TTLDDACYLN SPCDDDAFGA 
GMHIGYDFTD IIGLEYGVDY LGDYKANFKS GANTVDTIDG DLWALTLAPK FNWHLNDTWN 
LFAKIGGAYM ISGDEKDLVP TGSLGAEYTI DRNWSVRGEY QRYQGMSDNV IDDMDANFFG 
IGVNYKFAAA PVVAAIVTEE VLEEEPVLLT KTHKEEYGSG TFEFDSAKLT DSVSERLDNF 
VNFLNEYPQA QVEITGYTDS SGPAAYNLKL SERRAQAVAD YLIAAGIDAD RFTVTGMGEE 
DPVADNSTHE GREQNRRVVV HVPEFQYEEL VQPE