| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05923 |
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| Symbol | |
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| ID | 5558479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | + |
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| Start bp | 1111512 |
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| End bp | 1112963 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640910397 |
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| Product | methionine gamma-lyase |
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| Protein accession | YP_001448043 |
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| Protein GI | 156977137 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2116] Formate/nitrite family of transporters |
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| TIGRFAM ID | [TIGR00790] formate/nitrite transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGTGA CCAGCTCTCA AAATAACCAG TATTTTTCTC CAAAAGAAAT GATGGCTGAA
GCTGAGAAGT TTGCACTTAG TAAAGCAAAC AAAACCAGCG GCATGACACT GGGTTTGGCA
ATCATGGCAG GCGCATTCAT CGGTTTAGCA TTCTTGTTTT ACATCACAGT GACAACAGGT
AGTGCGGATG CAGGTTGGGG GCTTAGCCGT CTTGCAGGTG GTTTAGCATT CAGTATGGGT
TTGATACTCA TCGTCATTTG TGGTGGTGAG TTGTTTACCA GCTCAGTGCT TTCGAGCATC
TCATGGGCAA ACAAACAAAT CTCATTCGGC AAAATGCTGT CGATCTGGGG CAAGGTGTAT
GTGGGTAACT TCATCGGTGC GATGTTCCTA CTTGCATTGG TAAGCGCTGC AGGCTTGTAC
CAAATGGATG CGGGTCAATG GGGCTTAAAC GCACTAAACA TTGCGCAGCA CAAGCTACAC
CACACATTGG TACAAGCATT TGCACTGGGG ATTCTATGTA ACTTATTGGT TTGTCTTGCT
ATTTGGCTAA CGTTCAGTTC TGCAAATGCA ATGACAAAAG CAGCGATGAC CATCATGCCA
GTGGCAATGT TCGTCAGCAG TGGCTTTGAG CACTGTGTAG CAAACATGTT CATGGTACCG
CTAGGCATCG TAATCGCGAA TTTCGCACCA GAGACTTTCT GGACAGCAGT TGGCGTGCCG
GCTTCTCAAT ATGCAGATTT AAATGTCGGT CACTTTATTA CTGCAAACCT AATTCCAGTA
ACCCTAGGCA ACATCATTGG TGGCGCTGTG TTAGTTGGCT TAGCTAACTG GTGTATTTAC
CGTCGACCAG AACTAAAGGC AGCAAAAATT TCATCCATTA CAAACACTAC AACACTAACG
TCAGTTAAGG AAAGCACTAT GAAAAACGCA TCAATTGTAA AAGAAATCAT GAACCCGAGC
CCAGTTACTC TGAGCGTAGA AATGCCAGTT TCAACTGCAC TAGATACCCT ATTGTACAAC
AATCTAATCA GTGCTCCTGT TGTTGACATC GACAATCGTT TGGTTGGTTT CTTTTCAGCG
CACGACGTAA TGGTTGAATT GTGGTGCCAA GATTACATCC CTGTTCAAGA ACAAAAAGTG
GTAGATTTGA TGAGCCGTGA CGTTGTAGCG ATTGATGCTG GTGACCGTTT GGTAGATGTA
GTTGAGTTCC TATGTATCGA TAAGGAACAA CTTTACCCAA CAACAAGTAT GGGCATGGCG
ACACGCTTTA CTTCTCTTTC TCTTGAAGAG CGTGCTAAGA GCATCAAAGT GAGCAAACCA
CAAGTGCTTC CTGTATTAGA AAACGGTTTG ATGGCTGGCG TTGTGACACG TAGCGAAGTA
CTTAAAGCAC TGCGCCCAGT GTATGGCGAG CGTCTAAACC TAATTGAAGA TAACGTTCTA
GAAACGGCAT AA
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| Protein sequence | MAVTSSQNNQ YFSPKEMMAE AEKFALSKAN KTSGMTLGLA IMAGAFIGLA FLFYITVTTG
SADAGWGLSR LAGGLAFSMG LILIVICGGE LFTSSVLSSI SWANKQISFG KMLSIWGKVY
VGNFIGAMFL LALVSAAGLY QMDAGQWGLN ALNIAQHKLH HTLVQAFALG ILCNLLVCLA
IWLTFSSANA MTKAAMTIMP VAMFVSSGFE HCVANMFMVP LGIVIANFAP ETFWTAVGVP
ASQYADLNVG HFITANLIPV TLGNIIGGAV LVGLANWCIY RRPELKAAKI SSITNTTTLT
SVKESTMKNA SIVKEIMNPS PVTLSVEMPV STALDTLLYN NLISAPVVDI DNRLVGFFSA
HDVMVELWCQ DYIPVQEQKV VDLMSRDVVA IDAGDRLVDV VEFLCIDKEQ LYPTTSMGMA
TRFTSLSLEE RAKSIKVSKP QVLPVLENGL MAGVVTRSEV LKALRPVYGE RLNLIEDNVL
ETA
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