Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05915 |
Symbol | |
ID | 5558440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 1105879 |
End bp | 1107513 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640910389 |
Product | hypothetical protein |
Protein accession | YP_001448035 |
Protein GI | 156977129 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACTAG AACGCATCGA AATCTCTGGG TTTAGAGGCA TCAAACGCCT TTCACTCTCT TTTGACGAAC TGACAACTTT GATCGGTGAG AATACATGGG GTAAGTCTTC CCTACTCGAC GCTTTGTCTC TCGCCCTGCC CGCTGACGGT TCTCTTTATC AGTTCCAAAT GACGGACTTT CACGTCGACT ACGCAATATC ACACCCACAA ACCCAGCATC TTCAAATCGT ACTTTGCTTC AAAGCGCAGG ATAAGCAAGA AGTAAATGCT GGGCGCTACA GACGAATCAA ACCAACATGG TGTGTTAACG AAAATAACGA GCACGTGATT TATTACCGTT TAAGCGCAAG CAGAGACGGC CATAACATCA CCTCCAAATA CGCATTCTTG GACTCCGATG GTGAAGACAA ACAACTGCAC CATTCTGAAA AACTCGCAAT AGAGTTGATG ACACTGCATC CCGTGATCCG GTTGCGTGAC TCACGCCGTT TCCCTGAGCC AAATCACATC AATGGTGACA ACAAGAACGC TCGCATCGAG AAGCGCATCA ATAACACCTG CCGCCGCCTA TTTGCCATGC CTGGTCATGT GAACAAAGGT GAAGTGCGCA GCAGCCTTGA TTCAATGCAC ACTCTGGTCG AGCACTACTT TGCATTCCGA AGTGTGAAAA AAGGTCACCC GAGAAAACCG CGAGATGGCT TGTTCTACGC CAGTCCGTCA GCAGAAAAAG GATTGTCGCA GTTTTTAAGG GAAACAAACA ACAAACAAAC CCGACTGCTA CTTATGGGGT TGTTGAACGC GTACCTACAA GCAAAAGGTC CCACCGATTT AAGACGTTGC GCTCGCCCCA TCTTGATCAT TGAAGATCCA GAGGGTCGTT TGCACCCGAC TCACTTATCT CGCGCTTGGA GTTTGTTGCA GTTACTACCG ATGCAGAAGA TCCTTACGAC AAACAGTGCG CGTTTACTTG GCTCCGTACC TTTGGCATCA ATTCGTCGTT TGGTTCGTTT ATCGGATCGA ACCATCGCAA AATCGCTCAA TACTAATCAC TTTAGTGTCG ACCAATTACG ACGTATTGGT TTCCATATTC GTTTTCATCG CGCCGGCGCC CTATTTGCCC GTTGCTGGTT ATTGGTCGAA GGAGAAACGG AAGTCTGGCT ATTTAACGAG TTGGCACGCC AGTGCGGTTA TGATCTCGCA GCAGAAGGAG TTCAAATCGT TGAATTTGCC CAATCAGGTC TGAAGTCATT AGTTAAAGTG GCGCAAGAGT TTGGTATCGA CTGGCATGTG GTGACTGACG GCGACCCTGC TGGTAAAAAA TACGCGCACA CAGTGAGAGT CCATTTAAAT AACGACCAAG AGCGTCATCG CCTTACCGAG CTACCCGATA GAGATATCGA GCACTTCCTC TATAACAATG GCTTTGAAAT TTTCTTTAAG GACATCATCA AAGTTCCTCG TGATCATCCT ATCCCAGCTA AGAAAGTCGT AAACCGCGTT TTGAAGAAAC AAGCAAAACC GGATCTCGCA CTCGCAATTG TTGCCCATTG CGAAGAGCGT GGCGTAGATT GCATCCCCGT ACTTTTGCGC TGGACGCTAA AACGCGTGGT AACTATGGCA AACGGGAATA CGTAA
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Protein sequence | MRLERIEISG FRGIKRLSLS FDELTTLIGE NTWGKSSLLD ALSLALPADG SLYQFQMTDF HVDYAISHPQ TQHLQIVLCF KAQDKQEVNA GRYRRIKPTW CVNENNEHVI YYRLSASRDG HNITSKYAFL DSDGEDKQLH HSEKLAIELM TLHPVIRLRD SRRFPEPNHI NGDNKNARIE KRINNTCRRL FAMPGHVNKG EVRSSLDSMH TLVEHYFAFR SVKKGHPRKP RDGLFYASPS AEKGLSQFLR ETNNKQTRLL LMGLLNAYLQ AKGPTDLRRC ARPILIIEDP EGRLHPTHLS RAWSLLQLLP MQKILTTNSA RLLGSVPLAS IRRLVRLSDR TIAKSLNTNH FSVDQLRRIG FHIRFHRAGA LFARCWLLVE GETEVWLFNE LARQCGYDLA AEGVQIVEFA QSGLKSLVKV AQEFGIDWHV VTDGDPAGKK YAHTVRVHLN NDQERHRLTE LPDRDIEHFL YNNGFEIFFK DIIKVPRDHP IPAKKVVNRV LKKQAKPDLA LAIVAHCEER GVDCIPVLLR WTLKRVVTMA NGNT
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