| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05872 |
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| Symbol | |
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| ID | 5556507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | + |
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| Start bp | 1062364 |
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| End bp | 1065048 |
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| Gene Length | 2685 bp |
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| Protein Length | 894 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640910346 |
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| Product | ClpA/B type protease |
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| Protein accession | YP_001447993 |
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| Protein GI | 156977087 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATGA TAAATATAAA CCTTTCTTCA TTAATTCAGC GTCTACACCC GATTGCAAAA
GTGGCATTAG AAGACGCGGC TGCACTTGCA GTCTCTGAAA AAGCAAACGA AGTTCAAATT
GAGCATTATT TACTGAGTCT TTTAGAAAGG CCAAATAGTG ATTTTGACGT CTTATTAAGT
CATTTTGATT GTTCTGAGAA CTTATTAAGA CAATCGGTTC GATCCACACT CGATACCAAC
GCCAAAGGAA ATGGCAGCAA ACCTGTTTTT TCTGCTTTAT TAATCGAATG GTTACAAGAA
AGCTGGCTGG TTTCTTCTTT AGATCTATCC GAAACACAAA TCCGCTCTGG CGCCCTACTC
CTTACTCTTG TTAGCAACCC TCTACGTTAC GGCCAAAATG GTTACGCCTC TATCCTTGAA
GCGGTAAACC CTGACAGCCT TAAGCGTAAC TTTGCAGAGC TAACAAGCCA CTCTATTGAG
GCGCAAGTCG CGACTTCCGA AAAAACACAA GCTCGCGAAG ATGGCTCGGC ATTGAGCAAG
TTCACGACAG ACTTCACTGG TAAAGCACGC AAAGGCGAAA TCGATCCTGT TTTCTGCCGC
GACCAAGAAA TCCGCCAAAT CGTGGACATT CTTGCTCGTC GCCGTAAAAA CAACCCTATC
GCTGTCGGTG AGCCGGGCGT TGGTAAAACC GCAGTCGTAG AAGGCTTGGC GCTAAAAATC
GTACAAGGCG ACGTACCAGA CAACCTTAAA GGTGTTGAGC TTTATGGTCT GGACATGGGT
CTTCTACAAG CAGGTGCAAG CGTAAAAGGT GAATTCGAAA AACGCCTAAA CGCAGTATTG
GATGAAGTGA AAAACTCGCC AACGCCAATC ATCCTATTCA TCGATGAAGC ACACACTCTA
GTCGGCGGCG GTAACCAAGC GGGCGGCAGT GATGCAGCCA ACTTGTTAAA ACCTGCCCTA
GCACGTGGCG AAGTGAAAAC AATTGCTGCA ACAACCTGGT CGGAATACAA AAAGTACTTC
GAGAAAGATC CAGCGCTTGC ACGTCGCTTC CAGCTGGTAA AACTTGATGA GCCTTCTCCA
GAGCAAGCGG CATTGATCAT TCGTGGTCTG CGCCCAGCTT ACGAGAAGTC ACACAATGTA
TACGTACGCG ATGACGCGAT CACCGCAGCT GCAGCGCTTT CTGCTCGTTA CATCTCTGGC
CGTCAACTAC CAGACAAAGC GATCGATGTA CTAGATACGG CATGTGCGCG AGTGAACATC
AGCCTTAATG CTATCCCTGC TTCTGTAGAA ACACTTCAGC AAGAACTTGC TGCCCAACAG
CGCGAGCTTG AAGCACTTGA GCGTGATGCT CTGCAGCAAA CTGGTGACAA GCACAGCCTT
GCTAACATTC CGGACCTAAA ACTGGCAATG GAAACAACCA AAGAAGAGTT AGCAGAGCAA
GAAGAGCAAT GGCACAAAGA AAAAGAGCAG ATCCAAGAGA TGATTGCTCT ACGTTCTCGC
CTGCATGAAC TGGTCTTTGG CGAAGCAAAT GAAGAAGAGC TTGCTGCAGA CGAAGATTCA
GAACAAGATC AAGACGTTTC TCCATACGCA GAAATGGATG AAGAAGCGGT TCGCATTGCA
ATTTCAGCCT GCCAAGAACA GCTAGACGCA ATCCGCAATG GCAACCCACT GGTTCATTTT
GAAGTTGGCC CAGATGAAGT CAGCCACGTG ATCTCGGACT GGACCGGTAT TCCAATGGGT
AAGATGCTTC AAGACGAAGC AGAGACCACG CTAAAACTGA AAGAAAGCCT AACACAAAGC
ATCAAAGGCC AAGAATACGC TATCGATGCA CTGTCTGAAG GCATTCAAAC GGCGAAAGCT
GGCCTAGGTA ACCCAGACGC ACCAACAGGC GTATTCCTGC TGGTTGGCCC AAGTGGCGTG
GGTAAAACTG AAACGGCTCG TGCGATCGCT GATCAAATGT TTGGTGGCGA GCGCTTTATG
ACGACCATCA ACATGTCTGA GTTCCAAGAG AAGCACACGG TATCTCGCCT AATTGGTTCA
CCTCCGGGTT ACGTAGGTTA CGGTGAAGGC GGCATGCTGA CAGAAGCGGT ACGTCAACGC
CCATATTCAG TTGTACTGCT AGATGAAGTT GAAAAAGCCG ACCCAGAAGT GTTGAACCTG
TTCTACCAAG TGTTCGACAA AGGTACGTTA AACGACGGCG AAGGCCGCAC CATCGACTTC
AAGAATACGC TGATCATCAT GACCAGCAAC CTTGCGACGC ACGAGATTGA ATCTTTGGTT
CATCAATCAA AAGACATCGA TGCAAACATC ATCGCAGAAG CTATCCGCCC TACTTTGAAC
CAACACTTCA AACCGGCGCT GTTGGCACGT ATGTCGGTAC TACCATTTGT TCCGCTGTCT
GATGAAGCAA TGACAGAAAT CATTCACCAT AAGCTGAACA AAGTCTCTCA GCGTCTACAG
AGCCATCACA AATTGTCTCT GAGCTACGAA GAAAGCTTGG TTGAATTCGT ACTGGGTAAC
TGTCGCCTTG CTGAAACAGG CGCACGTAAC ATTGACGCGG TTATCAACCG TCAGTTACTG
CCGCAGCTAT CGACACAGCT ATTGGTGCAT GATAAGGATG ATTCACATAC GCAAATCGCA
GTTTCTGTCG ATGAGCAAGG AACACTAACC TATGCGTTCA GCTAA
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| Protein sequence | MAMININLSS LIQRLHPIAK VALEDAAALA VSEKANEVQI EHYLLSLLER PNSDFDVLLS
HFDCSENLLR QSVRSTLDTN AKGNGSKPVF SALLIEWLQE SWLVSSLDLS ETQIRSGALL
LTLVSNPLRY GQNGYASILE AVNPDSLKRN FAELTSHSIE AQVATSEKTQ AREDGSALSK
FTTDFTGKAR KGEIDPVFCR DQEIRQIVDI LARRRKNNPI AVGEPGVGKT AVVEGLALKI
VQGDVPDNLK GVELYGLDMG LLQAGASVKG EFEKRLNAVL DEVKNSPTPI ILFIDEAHTL
VGGGNQAGGS DAANLLKPAL ARGEVKTIAA TTWSEYKKYF EKDPALARRF QLVKLDEPSP
EQAALIIRGL RPAYEKSHNV YVRDDAITAA AALSARYISG RQLPDKAIDV LDTACARVNI
SLNAIPASVE TLQQELAAQQ RELEALERDA LQQTGDKHSL ANIPDLKLAM ETTKEELAEQ
EEQWHKEKEQ IQEMIALRSR LHELVFGEAN EEELAADEDS EQDQDVSPYA EMDEEAVRIA
ISACQEQLDA IRNGNPLVHF EVGPDEVSHV ISDWTGIPMG KMLQDEAETT LKLKESLTQS
IKGQEYAIDA LSEGIQTAKA GLGNPDAPTG VFLLVGPSGV GKTETARAIA DQMFGGERFM
TTINMSEFQE KHTVSRLIGS PPGYVGYGEG GMLTEAVRQR PYSVVLLDEV EKADPEVLNL
FYQVFDKGTL NDGEGRTIDF KNTLIIMTSN LATHEIESLV HQSKDIDANI IAEAIRPTLN
QHFKPALLAR MSVLPFVPLS DEAMTEIIHH KLNKVSQRLQ SHHKLSLSYE ESLVEFVLGN
CRLAETGARN IDAVINRQLL PQLSTQLLVH DKDDSHTQIA VSVDEQGTLT YAFS
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