Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05851 |
Symbol | |
ID | 5557217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 1035676 |
End bp | 1036467 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640910325 |
Product | hypothetical protein |
Protein accession | YP_001447972 |
Protein GI | 156977066 |
COG category | [S] Function unknown |
COG ID | [COG3455] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTTATG CAGAAACCGA CGTCACCGTA GTCTTATTCC AACCAGAGCC TGGCAAACCG ATGGAGGTGA TGCCAGCGCC TGACTTATCT CGTAACATCG CGGTACAAGA CTTAAACATT GAAAACATGG GCATCAACCC TTTGGTCGAT CAGTTCTCTT GGTTGATCGC CAGTTTGTCT TGTATGTCCT CAATTCCTTG GCTTGATGAC CCAATGCCGT TTCGTGAACA AGTGGCTCGC GAGATAAGAA AAGGCGAACG TAAGCTCAAT GAAATGGAAT TGGATCGCGC ATCCATTTTG GTCATCCGAT ACTGTTTGTG TGCTGCGATT GATGAATCGG TTTGCCGACA AGAGTGGGGC GCTAACAGCC ATTGGAGCCA GAACAGTTTG TTGTCCGAGT TCCACAATGA AACATCTGGC GGCGATAAGT TTTTCGTTAT TCTCGAGCGT TTAAAAGCAG ACCCGCGCAA ATACCGTCAC GTCATCGAGT TTCTCTATTT GCTGCTTCAA CTTGGCTTTC AAGGCAAATA CGGCCGTGAA GAGCGTGGTA ACGAAAAGCT CGCAGAAATC GGCAATACCA TTTATCGCCT AGTGCGTGAC GAACGTTTGG CGGAGCAAGA GAAAGTCTCT CTGGTTAACC TTAAGGCCAA ATACCTCAAG AAACCGTTAA AAAGGGTGAT TTCACCCAAA CTGATTTTAG GCGTCAGTGC GATCACCTTC GCAATCATGT ATGCCGCGAC TTACATCGTT ATAGATTTAA AGTTTCAGCA ATTGCTTGAA GTGTATCGAT AA
|
Protein sequence | MSYAETDVTV VLFQPEPGKP MEVMPAPDLS RNIAVQDLNI ENMGINPLVD QFSWLIASLS CMSSIPWLDD PMPFREQVAR EIRKGERKLN EMELDRASIL VIRYCLCAAI DESVCRQEWG ANSHWSQNSL LSEFHNETSG GDKFFVILER LKADPRKYRH VIEFLYLLLQ LGFQGKYGRE ERGNEKLAEI GNTIYRLVRD ERLAEQEKVS LVNLKAKYLK KPLKRVISPK LILGVSAITF AIMYAATYIV IDLKFQQLLE VYR
|
| |