Gene VIBHAR_05795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05795 
Symbol 
ID5557323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp982649 
End bp983404 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content45% 
IMG OID640910269 
ProductLamB/YcsF family protein 
Protein accessionYP_001447916 
Protein GI156977010 
COG category[R] General function prediction only 
COG ID[COG1540] Uncharacterized proteins, homologs of lactam utilization protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTGA ATAATCAGCA ACTGACACTA AATTGCGACA TGGGTGAAAG CTTTGGCGCA 
TGGAAAATGG GCGCAGATGA GTGCGTGATG CCTTTTGTCG ATATGGCAAA CATCGCTTGT
GGTTTTCATG CTTCTGACCC AAATGTCATG CACGATACAA TTACCCTTGC CAACCAACAC
GATGTAGAAA TCGGCGCTCA CCCAGGCTAC CCGGACCTAC AAGGTTTTGG GCGTCGCAGC
ATAAAAATGA CCAACGACGA AATCACTAAT ATGGTGATTT ACCAAGTCGG AGCTCTGCAA
GCTTTGTGCA AAGCGCAATA CACAGACATT GGCTATATCA AACCTCATGG TGCGCTGTAC
AACGATATGA TGCAAAGTGA TGGCGTTTTT CTTGCTGTCG TCAAAGCTGT GGCGCTGTTT
AAAGTGCCGT TGATGATTTT AGCCTCCAAA GAAAACGAAA AGTATCTCGA AATTGCTGAC
GATTTCGATG TGCCATTGCT GTTTGAAGCC TTTGCCGATC GTCTCTATCA AGATGATGGA
ATGCTCACAC CAAGAACGCA GCCTAATGCA GTATTAAACA GCGAACATGC CATTTTAGAA
CAAGTAAGAA TGCTGGCAGA GTCTGGTCGG GTAAAAACCG CTTCTGGTCA ATACATTCTT
CTAGAAGCCG ACACAATTTG TGTCCATGGG GATAACAACG AATCCATCGC TCTCGTTCAA
AAGATTCGTC AAAGTCTCTA CACCGGAGGA AATTAA
 
Protein sequence
MTLNNQQLTL NCDMGESFGA WKMGADECVM PFVDMANIAC GFHASDPNVM HDTITLANQH 
DVEIGAHPGY PDLQGFGRRS IKMTNDEITN MVIYQVGALQ ALCKAQYTDI GYIKPHGALY
NDMMQSDGVF LAVVKAVALF KVPLMILASK ENEKYLEIAD DFDVPLLFEA FADRLYQDDG
MLTPRTQPNA VLNSEHAILE QVRMLAESGR VKTASGQYIL LEADTICVHG DNNESIALVQ
KIRQSLYTGG N