Gene VIBHAR_05590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05590 
Symbol 
ID5558824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp794070 
End bp794906 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content48% 
IMG OID640910066 
Producthypothetical protein 
Protein accessionYP_001447720 
Protein GI156976814 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID[TIGR01184] nitrate transport ATP-binding subunits C and D 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAG CATTATTAGA TCTAACGCGT TTAGGGATGC GATTCCCAAC GCCGGATGGC 
GAGTTCATCG CGTTAAAGAA CGTCGATTTA CAAATCAATA AAGGTGAGTT TGTATCCCTG
ATTGGCCACT CTGGCTGCGG TAAATCAACG GTATTGAACT TAGTTGCGGG TCTGCACATG
CCAACAGACG GCGGCGTAAT AGTCGATGGA CGAGAAGTAG CTGGACCGGG ACCTGACCGC
GCAGTGGTGT TCCAAAACCA TTCATTATTG CCTTGGTTAA CCGTGTATCA AAACGTTGAG
CTTGCAGTAA AACAAATTGC CGGCAAAAAG GGCAAAGCGT GGATTCAGGA ACAAGTGAAT
CACTACTTGG AGTTGATTCA AATGCAGCAT GCCGCGCACA AAAAGCCGGA TGAAATCTCG
GGCGGTATGA AGCAGCGAGT CGGCATCGCA AGAGCACTGG CACTTCAACC AAAGGTTTTA
TTGATGGATG AACCATTTGG CGCGTTGGAT GCGTTAACTC GTGCGCATTT ACAGGATGCA
CTGATGAAGA TTCAAGCCGA GTTAAACAAT ACCGTCATCA TGATTACACA TGACGTGGAT
GAAGCGGTGC TGCTATCCGA CAAAATCGTG ATGATGACTA ACGGACCGGC AGCAACCATT
GGAGAGGTGT TAGAAGTAAA TCTACCTCGC CCTCGTGAGC GTGTAGCACT GGCGGATGAT
GCGCAGTATC AGAAGTGTCG ACAAGCGGTG TTGAAGTTCC TTTACGAGAA GCAATCCAAA
GTCGAGCTTC CTGCTTCGAA AGAAGACAAA CCCAAAACCG CAGCGCAAAC GGCATAA
 
Protein sequence
MEKALLDLTR LGMRFPTPDG EFIALKNVDL QINKGEFVSL IGHSGCGKST VLNLVAGLHM 
PTDGGVIVDG REVAGPGPDR AVVFQNHSLL PWLTVYQNVE LAVKQIAGKK GKAWIQEQVN
HYLELIQMQH AAHKKPDEIS GGMKQRVGIA RALALQPKVL LMDEPFGALD ALTRAHLQDA
LMKIQAELNN TVIMITHDVD EAVLLSDKIV MMTNGPAATI GEVLEVNLPR PRERVALADD
AQYQKCRQAV LKFLYEKQSK VELPASKEDK PKTAAQTA