Gene VIBHAR_05532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05532 
Symbol 
ID5558490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp738955 
End bp739527 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content47% 
IMG OID640910009 
Productprotocatechuate 3,4-dioxygenase beta chain protein 
Protein accessionYP_001447663 
Protein GI156976757 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3485] Protocatechuate 3,4-dioxygenase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACGAC GACACTTTTT AGCGCTGTGG ACATTGTTGT TCGCACCCTC TTTAAAAGCG 
AAAACACCAA TGCGACCGAC GCCAGCACAA ACAGAAGGGC CATTTTATCC AGTAGTGAAC 
ATTCCTCTTC GTCAAAACTT GATTCTGCAA TCAGAGGGCT TGGTCGGTGA ACCTATCGTG 
TTGCAAGGCA AAGTCGTAGA TACAACAGGA AACCCAGTTT CAGGCATCAA GGTAGAAATC 
TGGCAATGTG ATGGGCAGGG GATTTACGAG CATCCTAAGC AGCCAAATAA CGATAAGTTT 
GATGCTCACT TTGCAGGCTT TGGCGCAGTC GAAACTCAAT CGGATGGTCG CTACTTATTC 
CAGACTTTGT ATCCCGTGCC TTATGCCTCT CGTCCGCCGC ACATTCACGT CAAGTTGTGG 
CGTGATAACC AAGAGCTGCT GACCACTCAG TTGTACTTAA AAGGCAATAC TGGTGATGAA 
TGGTGGGGCG GCAAAGCCCG TGATTCTCTA CAGTTTGAAA CTATACTATT CGACGGGCGA 
TTAACGGGCG AATTTAACTT TGTGATTGGC TAG
 
Protein sequence
MERRHFLALW TLLFAPSLKA KTPMRPTPAQ TEGPFYPVVN IPLRQNLILQ SEGLVGEPIV 
LQGKVVDTTG NPVSGIKVEI WQCDGQGIYE HPKQPNNDKF DAHFAGFGAV ETQSDGRYLF 
QTLYPVPYAS RPPHIHVKLW RDNQELLTTQ LYLKGNTGDE WWGGKARDSL QFETILFDGR 
LTGEFNFVIG