| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05413 |
|---|
| Symbol | |
|---|
| ID | 5556540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009784 |
|---|
| Strand | - |
|---|
| Start bp | 636244 |
|---|
| End bp | 636894 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640909890 |
|---|
| Product | isoprenoid biosynthesis protein with amidotransferase-like domain |
|---|
| Protein accession | YP_001447545 |
|---|
| Protein GI | 156976639 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG TCGCAGTTAT TTTAAGTGGC TCAGGCGTTT ACGACGGTTC TGAGATCCAC
GAAGCAGTAT TGGCGCTCTA CGCCATCGAG AAAGCAGGGG CAACTTGGCA CTGCTTTGCA
CCTAACATTG ACCAACTCCA CGTCATCAAC CACCTAACTG GTGACGAAAT GGATGAAACA
CGCAACGTCT TAATCGAAGC GGCTCGTATC GCTCGCGGTA ACATTGATGA TGTCGCCAAA
CTCAACGTTG ATGAATACGA TGCCCTACTG CTTCCGGGTG GATTTGGTGC AGCGAAAAAC
TTAACCGACT TCGCCGTCTC AGGAGCGGAA TGTTCGATTA ATACTCATGT AGCCCAAGCG
TGTCGTGCAT TCGCTCAAGC GGGCAAACCT GCGGGCTATT TATGCATCGC GCCAACCATT
ATCCCTCTGA TTTACGGCCA AGGCGTACAA GGCACAATTG GTAACGATGA AGCAACGGCT
GCTGCATTTG GTCATATGGG TGGAGAGCAC GTAAACTGTC AGGTAGACGA GATACACTTC
GACGAGAAAC ACAACGTACT TTCAACTCCA GCTTATATGT TAGCGGAGAA TATCTCTCAA
GCTGCGTCAG GCATTGAAAA ACTGGTTGAT AAGTTAGTCA AAATCGCCTA A
|
|---|
| Protein sequence | MKKVAVILSG SGVYDGSEIH EAVLALYAIE KAGATWHCFA PNIDQLHVIN HLTGDEMDET
RNVLIEAARI ARGNIDDVAK LNVDEYDALL LPGGFGAAKN LTDFAVSGAE CSINTHVAQA
CRAFAQAGKP AGYLCIAPTI IPLIYGQGVQ GTIGNDEATA AAFGHMGGEH VNCQVDEIHF
DEKHNVLSTP AYMLAENISQ AASGIEKLVD KLVKIA
|
|---|
| |