Gene VIBHAR_05375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05375 
Symbol 
ID5557495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp601932 
End bp602510 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content49% 
IMG OID640909852 
Productcytochrome c-type protein NapC 
Protein accessionYP_001447507 
Protein GI156976601 
COG category[C] Energy production and conversion 
COG ID[COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit 
TIGRFAM ID[TIGR02161] periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAC TTAAAGCGTT TTGGAAGAGA CTGTCGAGCC CGAGCAAAGC TGCCGCTGGT 
GTAGTTTTGT TCCTAGGCTT CGCTGGTGGT CTTCTGTTTT GGGGCGCATT CAATACGACT 
ATGGAAGCGA CCAACACAGA AGAGTTCTGT TCTGGCTGTC ACGCTCCTAT CGTCGCTGAA 
ATTCAAGAAA CGATTCACTA CTCGAACCGC TCTGGTGTGC GTGCAATCTG TTCAGACTGC 
CACGTACCAC ATGAATGGAC CGATAAAATC GTTCGAAAAG TTCAAGCATC TAAAGAGCTG 
TTTGCCCACT TCGTAACGAA GACCATCGAT ACACCAGAAA AGTTCCAAGC ACGTCGTGAG 
CACCTTGCCG AACGTGAGTG GGCGCGTATG AAGAAAAACG ACTCTCTTGA ATGTCGTAAC 
TGTCATCAGT TCGATTACAT GGACTACTCT CAGCAAGGTA AACGTGCCTC AGCGCAGCAC 
TCTACAGCGT TGGCGTCAGG CGACAAAACC TGTGTAGATT GTCACAAAGG TATCGCACAT 
AAACTGCCTG ACATGCACGG CGTTGAAGGC TGGCAATAA
 
Protein sequence
MKILKAFWKR LSSPSKAAAG VVLFLGFAGG LLFWGAFNTT MEATNTEEFC SGCHAPIVAE 
IQETIHYSNR SGVRAICSDC HVPHEWTDKI VRKVQASKEL FAHFVTKTID TPEKFQARRE 
HLAEREWARM KKNDSLECRN CHQFDYMDYS QQGKRASAQH STALASGDKT CVDCHKGIAH 
KLPDMHGVEG WQ