| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05157 |
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| Symbol | |
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| ID | 5557429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | + |
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| Start bp | 396440 |
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| End bp | 397780 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640909634 |
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| Product | hypothetical protein |
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| Protein accession | YP_001447290 |
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| Protein GI | 156976384 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAATC AACTGCCAAC CGTTAATGAA CTTGCAGCAG AAAAAGTATT CCGCTTTTTG
CCCTCTTCGG AGCTTCACTT GAAAGGCCCG ATTTTATTAG GTGTCTTAAC GCTAAGCCTG
TTTCTTGGAG GGTTGGGCTA TTGGGCTGCC ACGGCGAAAC TGGAGAGTGC TGCTATTGCT
TACGGTGATC TATCGGTATT AAGTAAGCGT CAGGAAATCC AACACTTGGA AGGTGGCATT
ATTGAAAAAC TCTATGTTCA AGAGGGCGAC TTAGTGGAGA AAGGGCAATT GCTCCTTCGG
CTTTCAAAGC GCCAAGCCAA TGCGAAACTT GACTCTCTTG GCGGTCAGTA TATTCATACT
TTTGTTAAAG AAAACCGTTT GAATGCGGAG TTAGATGAGC TACCGGACAT CAACTGGGCA
CATGACCTTG AGACCATTCA AAATGGAGAA ATTGTCGCCG AGGCCAAGTT GGTCCAAAGC
AAAATTTTCG AGGCTAGGAA ACGCTTTTTT GACAGCAAGT TAAACATCAT TGCGCAAAGT
ATATCTGGCG CAGATTTAGA ACTGGATAAC CTCAGTGAAA CGAAAGTTAT TGAACGTGAA
CGCTTGAAGT TTATTGAAGA AGAGATAGCC AGTAATCAAG CGTTGGTACA GAAAGGTTTC
TCTGGAAAGT CGGCGTTACT TCAGCTCAAA CGTCTTGCAG CAGAAGTGCG TAGCACGTTG
AGTCAACTTG ATCGCCAGTC GCTCACCGTT AGTAAGCGGC TAGATGAAAA CCAAGCAAAG
ATCGAAGAGC TAAAGCTAGA GCGACTCAAT GAAATTGTCG AGGAGCTACG CAACACCAAA
AAAGAGCTCG TCTCTATTCG GGAGGAGTAC CGTTCAGCAA AAGACATAGT GGCACGTACC
GACATTGTCG CTCCTATTTC TGGCAGGGTC GTCAATATGC AGGTCTTTAC TGAAAAAGGT
GTCATTGGTT CGGGAGAGAC GTTGCTTGAG CTGGTTCCTC AAGATGACAA GCTGCTGGTG
GAGGCTCGCG TGAGTCCCCA AGACATCGAT TTAATTACAC CGGGGCAACA TGCTCAAGTT
CGTTTGACGG CTTTGAATGC GAGAACACTC GCGCCCTTGG ATGGTACAGT GTTAACGATT
TCAGCAGATA AATTGTCTGA ACAGAACCAA GATGACTTTT ATCTTGCTCG CATCGCCTTG
TCTCAAGAGG ACGTCGCAAA GCATAGGTTG ACATCAGGTA TGAATGCAGA GGTACTGATT
TTATCTGAAC CAAGGACACC GCTGAGTTAT TTGGTTAAAC CATTAACGGA AAGTATGAAT
CGGGCATTCA GAGAAGATTG A
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| Protein sequence | MSNQLPTVNE LAAEKVFRFL PSSELHLKGP ILLGVLTLSL FLGGLGYWAA TAKLESAAIA
YGDLSVLSKR QEIQHLEGGI IEKLYVQEGD LVEKGQLLLR LSKRQANAKL DSLGGQYIHT
FVKENRLNAE LDELPDINWA HDLETIQNGE IVAEAKLVQS KIFEARKRFF DSKLNIIAQS
ISGADLELDN LSETKVIERE RLKFIEEEIA SNQALVQKGF SGKSALLQLK RLAAEVRSTL
SQLDRQSLTV SKRLDENQAK IEELKLERLN EIVEELRNTK KELVSIREEY RSAKDIVART
DIVAPISGRV VNMQVFTEKG VIGSGETLLE LVPQDDKLLV EARVSPQDID LITPGQHAQV
RLTALNARTL APLDGTVLTI SADKLSEQNQ DDFYLARIAL SQEDVAKHRL TSGMNAEVLI
LSEPRTPLSY LVKPLTESMN RAFRED
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