| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05156 |
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| Symbol | |
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| ID | 5557428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | + |
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| Start bp | 394735 |
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| End bp | 396465 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640909633 |
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| Product | heme acquisition ABC transporter HasD |
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| Protein accession | YP_001447289 |
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| Protein GI | 156976383 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAGTAA TCGTGCAAAA TACGGTTTTC AAAGAAGTTA AACAAAAACT ATGCACGCTG
ACGGGCCTGC TGATTGGTTT TAGTTTATTT ATAAATTTAT TAGTGCTCTC TATACCTCTG
TACATGTTGC AAGTGTACAA CCGCGTTATC TCTTCCTACT CGATTGATAC CCTCTTTTTA
TTGACAGTGA TTGTTTTGGC TGCGCTTTTA ACTATGTCGC TGATTGATAT CGCGCGAGCT
CAGATGAGTA AGTCGTTTGG GTATTGGATT GATTCAAAAC TTTCGGTATT TATGCTCAAA
CGAAGCATTC AGTACCAAAC ACACACGGGC AAAAGCTATA CATCTCAGGC GTTGAGAGAT
ATCCAAAACA TTAAAAGCTT CCTCAGTAGC CAAGCGCTTT ATCCTTTGCT TGATGCACCT
TGGACCCCGG CTTTTATACT TTTCGTTTAT TTGCTGCACC CTGTTTTGGG CCATATTGCG
TTAGGGGGGT CAATTGTTTT GTTTAGTTTG GGCGTGATCA ATGAGCTCGT GACTCGAAAA
ACCATGCAAG AAAGTGAAGT TCGATCGATA TCTCACATCA ATCAAGCAGA AGTAGCGACT
CAAAACGCGA ATTCAATTAT GGCTATGGGC ATGATGAATG CTTTTCTGGA AAACTGGTAC
TCACGTGTTA ATGAGTCTAA TCAACTGGAA CAACGTGTTA CTGGTAAGTC GATTTACCTC
GCTAACTTTT CGAAGTTCGT ACGCGGCTCC CTTCAGATAT GCTTATTAGG AGGTGGTGCT
TGGTTGGTCA TCCAACATGA GATTACCGCA GGCGCGATGA TCGCCAGTTC TATTCTAATG
AGTCGCGCAC TCTCTCCGAT GGAGCAAGCA ATCGGTACAT GGCGCAGCGC GATGTCCGCC
AGAAATGCTT ACAAGCGTTT ATGGGAGATT GATCGGATTG TTAAACAAGA TGAATCTGAC
ATGCCTTTGC CTCGTCCAAA AGGTCACTTT GAACTAACGG GGTTAGCTTA TCGTCACCCA
GGAGTATCGG AACCTGTTTT ATCAGCGATA TCACTGTCGA TTCCGCCAGG TATTTCTGTG
GGCGTTATTG GCCCTTCCGG AACGGGAAAG TCAACGTTTG CAAGACTACT ACTCGGAAAC
ATCAAACCTT TGGCTGGCAA GGTCACCTTA GATGGTATGG AAGTATCAAC GTGGGCTTCA
GAAGACAGAG GTGCTCACTT TGGTTATTTA GCTCAGGAAG TGGAGTTATT CCCCGGAACA
ATTCGAGACA ATATTGCTCG ATTCAAAGAT GAAGACCCGG CAAAAGTGAT TCAAGCTGCT
CAACTTGCAG GGTGTCATGA ACTTATTCTT AAGAAAAACA AAGGCTATGA CTTTACCATC
GGGGAAAATG GCCGCGGCTT ATCCGGTGGA GAGCGACAAC GCATTGCTCT GGCAAGAGCC
GTTTACGGTG ACCCTTCTGT TGTCGTGTTT GATGAAGCAA ACGCGAACCT AGATGGAGAA
GGTGAGGCGT CATATCAACG TTTAATAGCA CACCTCAAGT CTCAAGGCTC AACAGTGGTT
GTGATTGCTC ATAACCCAAG TACGTTAAGG CAAATGGATC GACTTCTGTA TTTAGCCGAC
GGACGAGCTA AGTTATACGG AGCGCGAGAC GAAGTGTTGA AACGTTTGAT GGGAGAAGAT
AGAACAGATA TACCGAGGGT GCGAAATGAG CAATCAACTG CCAACCGTTA A
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| Protein sequence | MEVIVQNTVF KEVKQKLCTL TGLLIGFSLF INLLVLSIPL YMLQVYNRVI SSYSIDTLFL
LTVIVLAALL TMSLIDIARA QMSKSFGYWI DSKLSVFMLK RSIQYQTHTG KSYTSQALRD
IQNIKSFLSS QALYPLLDAP WTPAFILFVY LLHPVLGHIA LGGSIVLFSL GVINELVTRK
TMQESEVRSI SHINQAEVAT QNANSIMAMG MMNAFLENWY SRVNESNQLE QRVTGKSIYL
ANFSKFVRGS LQICLLGGGA WLVIQHEITA GAMIASSILM SRALSPMEQA IGTWRSAMSA
RNAYKRLWEI DRIVKQDESD MPLPRPKGHF ELTGLAYRHP GVSEPVLSAI SLSIPPGISV
GVIGPSGTGK STFARLLLGN IKPLAGKVTL DGMEVSTWAS EDRGAHFGYL AQEVELFPGT
IRDNIARFKD EDPAKVIQAA QLAGCHELIL KKNKGYDFTI GENGRGLSGG ERQRIALARA
VYGDPSVVVF DEANANLDGE GEASYQRLIA HLKSQGSTVV VIAHNPSTLR QMDRLLYLAD
GRAKLYGARD EVLKRLMGED RTDIPRVRNE QSTANR
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