| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05122 |
|---|
| Symbol | |
|---|
| ID | 5557535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009784 |
|---|
| Strand | + |
|---|
| Start bp | 359242 |
|---|
| End bp | 360657 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640909599 |
|---|
| Product | deoxyribodipyrimidine photolyase |
|---|
| Protein accession | YP_001447255 |
|---|
| Protein GI | 156976349 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCTGG TTTGGTTTCG ACGTGATCTG AGAACGTTAG ACCACACAGC GTTAAAGGCT
GCCTTGGATA CGGGGCAACC TGTTGTGGCT GCTTTTGTTT CGACACCGGA ACAATGGCAA
GAGCATAATA TGGCGCCAAT GCAGGCAGAC CTGATCGCGC GACGCTTGGT GCATCTCGAT
GAAGAACTCG CAGACCTCAA CATACCGCTT CTATATAAAG AAGTGCCCAA ATTTTCTGAC
GTGACAGGTG TCATCAAAGG TTGGGCATTG TCGTTAAACG CGAAAAGCGT GATGGCAAAC
ATCCATTATG AGGTCAACGA ACAAGCGTTA GACAGGGAAA TAGCGGATGT TTTAGCTAAA
AGCCAAGTCA CGTTTGAAGC TTTCCACGAC AAATGTGTTC ATGCGCCTAC CACGGTGTTA
AACAAGCAAG GTGAATATTT CAAGGTATTC ACGCCATTCA AACGCGCTTG GTTGTTGAAA
TTCCAAATGC CAATGGTGTC GAAACCACAA CCGCAAGCTG AGATTCTTCA AGAAGCGACC
CAGCCGCTTG AAGCCGATCG CTACCATGCA GACGTACCTT TCACTTACCC GCGTGAATCT
AGTGAACAAT GGTTCGTTTC AACAAGTGAT ATTGTGCATC ACTTGCGAGA ATTCGCTCGA
GAGCGCAGCG ATGCTTATCA AGAGAAAAGA GACCTTCCTT CTGTTGATGG TACGAGTCAG
TTGTCTCCAT ATCTTGCCAT TGGCGCATTA TCGCCAAGAC AGTGTATTGC TCGTCTTTAT
GCAGAGAACC CGCATACTGA CCTTACGGAC GGGAAAGCGA CGTGGCTAAG TGAAATCATC
TGGCGTGAAT TTTACCAACA CTTATTAGTG TTCGAACCAA AACTGGTGAA AGGTAAAGGC
TTCATTCCTT GGGAAGATAA GATTGAATGG TCTTATGATG AGGCGGCGTT CGAGCGTTGG
AAAACTGGAA CAACAGGGTA CCCAATTGTT GATGCTGCGA TGCGCCAACT AAACACGACG
GGTTGGATGC ACAACCGCCT ACGCATGATA GTGGCAAGCT TCTTAACCAA AGACCTACAC
ATCGACTGGC GTTGGGGTGA GGCGTACTTT ATGAGCAAGC TGGTGGATGG AGACTTCGCT
GCGAACAACG GTGGTTGGCA ATGGTCGGCG TCTACCGGAT GTGATGGGCA GCCTTACTTC
CGCATTTTTA ATCCAATCAG TCAGGGTGAG AAATTTGACT CTGATGGCGC ATTTGTTCGC
TATTGGGTCC CGGAAATCAA ACAGGTACCA AACAAATTTA TTCATAACCC ATGGCTATGG
AGCGGCTTTA ATTTACTGGA TTATCACAAG CCGATGGTTG ATCACAAGGT AGAAAGAGAG
ATAACCTTAC GGCTCTTCAA AAACGCCAAG GAATAG
|
|---|
| Protein sequence | MILVWFRRDL RTLDHTALKA ALDTGQPVVA AFVSTPEQWQ EHNMAPMQAD LIARRLVHLD
EELADLNIPL LYKEVPKFSD VTGVIKGWAL SLNAKSVMAN IHYEVNEQAL DREIADVLAK
SQVTFEAFHD KCVHAPTTVL NKQGEYFKVF TPFKRAWLLK FQMPMVSKPQ PQAEILQEAT
QPLEADRYHA DVPFTYPRES SEQWFVSTSD IVHHLREFAR ERSDAYQEKR DLPSVDGTSQ
LSPYLAIGAL SPRQCIARLY AENPHTDLTD GKATWLSEII WREFYQHLLV FEPKLVKGKG
FIPWEDKIEW SYDEAAFERW KTGTTGYPIV DAAMRQLNTT GWMHNRLRMI VASFLTKDLH
IDWRWGEAYF MSKLVDGDFA ANNGGWQWSA STGCDGQPYF RIFNPISQGE KFDSDGAFVR
YWVPEIKQVP NKFIHNPWLW SGFNLLDYHK PMVDHKVERE ITLRLFKNAK E
|
|---|
| |