Gene VIBHAR_05097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05097 
Symbol 
ID5558641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp335476 
End bp337104 
Gene Length1629 bp 
Protein Length542 aa 
Translation table11 
GC content48% 
IMG OID640909574 
Productsensor protein TorS 
Protein accessionYP_001447230 
Protein GI156976324 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCTAT CACTGAAAAA CTTGTCGGTA CGAACGCAAG TTTTGGTTCC AGTTCTATTC 
ACCGCGATCA CTCTGTTTAT TACATTGTGG ATCACTCAAA ACAACCTAGA AGCAGAGCAA
GAATTGGTTG CTTCTAACTC CGATTCTCTC GTGTTTTACA AAGGCACGCT GGCTCAAATT
GATGACCAAG TTTACCCATT ACGCATAAGC GCGGTTTACG CGATCTACGA TGCTGCTCGT
CGTGATGCGT TTCTTACTGA ACTGAAAGCG GGCGCAAAAG CCATTGATAC AGACCTTGAT
CTTATCGATG CACGCGGTAC GTTCAGCAAA GACGCGGAGA AGGTTCGTCA AAGTATCGAT
GCTTACATTG ACTACTCGAC TCGTGCTGTT GAATTCTTTA ACCGCCATGA CCGTGGTTTA
GTGTCGGATA ACGAATACAC AAACTTCATC TCAGGTTACC GCCGTGTGGG CAACGAAATG
GTTGCAACCA TCAACGCACT ATCACAGCGT GTGAATGAGA TTGCTACGGA AGCAACTGCA
GAGAGCGCAC ACCAGCATAC TCGCGTACAA AACAATGCCA TGATGTCAGT GATTGCGGTA
TTTGCATTCT CTTTACTAGG CGCTTGGTTC CTATCTGGCA TGATCGTAAC GCCAATCCAA
AAACTGCAAG AAGTGATGCG TAAGCTAGCA GGTGGTGACC TGTCGGTACG TGCAGACATT
GATGGCGACA ACGAAATTTC TCAGCTAAGC AAAGACGTAA ACCAAACAGC GAAGCAACTT
CACGATACGG TTGATCAATT GATGCGCATC AGTGAAGAAG TCGCTTCTGC TTCAACTGAG
CTTGCAGCAG TAATGACGCA AGCAGAAGCA AATGCTCAGC AAGAGCTAGC GGAAATCGAG
CAAGTTGCGT CGGCAGTCAA TGAGCTAGCG AGCACGGCTA ATAACGTAAG TGATAACGCG
ACATCTGCAG ATGCAACAGC ACGTGAAGCT GACGGCCTAG CGCAATCTGG CCTAGCGATC
TTCCAAGAGA GTGCACAAGC AAGCGAGCAA ATGTCTCAAG CACTGAACGA TGCTGCGCAA
GTGGTTCTGC GTCTAAAAGA GCAATCCGTT CAAATCAACG ACGTTATCGA AGTGATTCGT
GGCGTATCTG AGCAAACGAA CCTTCTAGCC CTAAATGCCG CGATTGAAGC CGCTCGTGCT
GGTGAATCTG GCCGTGGTTT TGCCGTGGTA GCTGATGAAG TGCGTATGCT GGCTGCTCGT
ACACAAGACT CTACGCAAGA AATCTCAGCT ATCATTGAAG AGCTTCAAGC GCAGTCTGGT
CTAGCCAACG ACAGCATGCA GGTGAGCCTA GAGATGCTTA ACCGCAACAA CGAGCTGACT
CAACAAGCGA ACGACGCACT GATCGGCATT ACAGAATCGG TAGCGAATAT CAACGACTCG
AACACGCAAG TGGCGACTGC GGCGGAAGAA CAGTCTCAAG TAACACAAGA CATCAACCGT
AATGTCGTCA ACATGTCTGA GCTTGTGAAT CAAAACGTAG CGGGCATTAG CCAAAGTGCG
AGTGCAAGTA CTGAGCTTTC TCACCTTGCA GAGAAACAAA AAGAACAGTT GAGCTTCTTC
AAGCTATAA
 
Protein sequence
MQLSLKNLSV RTQVLVPVLF TAITLFITLW ITQNNLEAEQ ELVASNSDSL VFYKGTLAQI 
DDQVYPLRIS AVYAIYDAAR RDAFLTELKA GAKAIDTDLD LIDARGTFSK DAEKVRQSID
AYIDYSTRAV EFFNRHDRGL VSDNEYTNFI SGYRRVGNEM VATINALSQR VNEIATEATA
ESAHQHTRVQ NNAMMSVIAV FAFSLLGAWF LSGMIVTPIQ KLQEVMRKLA GGDLSVRADI
DGDNEISQLS KDVNQTAKQL HDTVDQLMRI SEEVASASTE LAAVMTQAEA NAQQELAEIE
QVASAVNELA STANNVSDNA TSADATAREA DGLAQSGLAI FQESAQASEQ MSQALNDAAQ
VVLRLKEQSV QINDVIEVIR GVSEQTNLLA LNAAIEAARA GESGRGFAVV ADEVRMLAAR
TQDSTQEISA IIEELQAQSG LANDSMQVSL EMLNRNNELT QQANDALIGI TESVANINDS
NTQVATAAEE QSQVTQDINR NVVNMSELVN QNVAGISQSA SASTELSHLA EKQKEQLSFF
KL