Gene VIBHAR_05002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05002 
Symbol 
ID5558835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp258932 
End bp259969 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content43% 
IMG OID640909480 
Productintegrase 
Protein accessionYP_001447136 
Protein GI156976230 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGTAC GCAATTTGAA AGATGGCTCA ACCAAACCTT GGATCTGTGA ATGCTACCCA 
AACGGGAGAG CAGGAAAACG CGTTCGTAAG AAGTTCGCTA CAAAAGGCGA AGCTAAAGCC 
TTTGAGCTTC ACACAATGAA AGAGATTGAC GATAAGCCCT GGATGGGTAT TAAACCGGAT 
AACCGAAGAA TGAGTGAGCT TTTGGAAAAT TGGTGGACTA TCCATGGCCA TACTTTAAAG 
TCAGGCAAGC AAGCCAAAGA TCTCATATCC AAAACAATTG AAGAGTTAGG TAACCCAATT 
GCCTGCCAGT TTAAAGAACG AGACTACCTG GCGTATCGAG CAGCTCGAAC CCCCTATCGG 
GGCAAGAATA AATCCATCGA GATATCTCCA ACCACACACA ACCTTGAACT GATTTATCTA 
AAGGGCATGT TCAAGAAGCT GATTAAGTAC AATCAGTGGA AATATCCCAA CCCGCTTGAA 
GCAATCGAGC CTATCAAAAC CAGTGAGAAG CATCTTGCCT ATCTAACCAA GCCACAAATC 
GACGAGTTCT TTGATGAACT GCAGAACTGT AAGCGAGTTA TCAAGGCATC AATCCCACAA 
ATTATTGTCA TCGCAAAAAT CTGTTTGGCC ACCGGTGCAC GAATCAGTGA GGCACTCACT 
CTGACTCGCA CTCAAATAAC CGAGTTCAAA TTGACTTACA CCGATACAAA AGGGAAAAGG 
AATCGCAGTG TGCCAATCTC ACCATCTTTA TATCAAGAGA TATTAGATAT AGCGGTAAGC 
GACCATGACA TATTTAACAC CAGCTACAAA GATGCTTGGC GTTACATAAA AAGAGCCTTG 
CCTGAGCACG TTCCGAATGG GCAAGCGACC CATGTTTTAC GGCATACTTT TGCTTCGCAC 
TTTATGATGA ATAAAGGGGA TATTTTGGTG CTGCAGCGTA TTCTTGGCCA CACAAAAATC 
GAGCAAACAA TGGCTTATTC TCATTTTGCC CCAGAGCATT TGATGCAGGC TGTTCACCTC 
AATCCTTTAG AGAATTAG
 
Protein sequence
MSVRNLKDGS TKPWICECYP NGRAGKRVRK KFATKGEAKA FELHTMKEID DKPWMGIKPD 
NRRMSELLEN WWTIHGHTLK SGKQAKDLIS KTIEELGNPI ACQFKERDYL AYRAARTPYR 
GKNKSIEISP TTHNLELIYL KGMFKKLIKY NQWKYPNPLE AIEPIKTSEK HLAYLTKPQI 
DEFFDELQNC KRVIKASIPQ IIVIAKICLA TGARISEALT LTRTQITEFK LTYTDTKGKR 
NRSVPISPSL YQEILDIAVS DHDIFNTSYK DAWRYIKRAL PEHVPNGQAT HVLRHTFASH 
FMMNKGDILV LQRILGHTKI EQTMAYSHFA PEHLMQAVHL NPLEN