Gene VIBHAR_05001 details

Gene Information

• Locus tag: VIBHAR_05001
• Symbol: tdh
• ID: 5558793
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009784
• Strand: +
• Start bp: 257738
• End bp: 258820
• Gene Length: 1083 bp
• Protein Length: 360 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640909479
• Product: L-threonine 3-dehydrogenase
• Protein accession: YP_001447135
• Protein GI: 156976229
• COG category: [E] Amino acid transport and metabolism; [R] General function prediction only
• COG ID: [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases
• TIGRFAM ID: [TIGR00692] L-threonine 3-dehydrogenase; [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGAAT TTTTTGTCAC GCATAGAGCG GGGCAATGTT TGGTGAATAC TATGAAAATT 
AAAGCATTAT CAAAGCTAAA GCCTGAACAA GGCATCTGGA TGACTGAGGT TGATAAACCT 
GAAGTTGGCC ATAACGACAT TCTGATCAAA ATTAAGAAAA CCGCTATCTG TGGTACAGAC 
GTACACATCT ACAACTGGGA CGAATGGTCA CAAAAGACAA TTCCAGTGCC TATGGTTGTT 
GGTCACGAAT ACGTGGGTGA AGTGGTTGCG ATTGGCCAGG AAGTTCGTGG CTTTGAAATC 
GGTGACCGCG TATCTGGCGA AGGTCACATC ACGTGTGGTC ACTGTCGTAA CTGTCGTGGC 
GGCCGTACTC ACCTATGTCG TAACACGATT GGTGTGGGCG TTAACCGTGA AGGTGCATTC 
GCTGAATACC TAGTGATCCC AGCGTTCAAC GCGTTCAAGA TCCCTGAAGG CATCTCTGAC 
GATCTAGCGT CTATCTTTGA CCCGTTTGGT AACGCAGTAC ACACCGCGCT TTCTTTCGAC 
CTAGTAGGCG AAGACGTGCT TATCACAGGT GCTGGCCCAA TCGGTATCAT GGCAGCAGCA 
GTAGCGAAAC ACGTAGGTGC TCGCCACGTA GTGATTACAG ACGTGAACGA ATACCGTCTA 
GAGCTTGCTC GTAAGATGGG CGTAACACGC GCAGTAAACG TTGCAGAAGA GAAGCTAGAA 
GACGTCATGT CTGAGCTAGG CATGACAGAA GGCTTCGACG TTGGTCTAGA AATGTCTGGT 
AACCCAGCCG CATTCAACTC AATGCTAACC ACAATGAACC ACGGTGGTCG TATTGCACTA 
CTGGGTATTC CACCATCAGA CATGGGTATC GACTGGAACC AAGTTATCTT CAAAGGCTTG 
GTGATCAAAG GTATCTACGG CCGTGAAATG TTCGAAACTT GGTACAAGAT GGCTTCTTTG 
ATTCAATCTG GTCTGGATCT ATCGCCAATC ATCACGCACC ACTACAAGAT TGATGACTTC 
CAAGAAGGCT TCGATGTCAT GCGTAGCGGG ATGTCTGGCA AGGTTATCCT TGATTGGGAA 
TAG 

 

Protein sequence

MKEFFVTHRA GQCLVNTMKI KALSKLKPEQ GIWMTEVDKP EVGHNDILIK IKKTAICGTD 
VHIYNWDEWS QKTIPVPMVV GHEYVGEVVA IGQEVRGFEI GDRVSGEGHI TCGHCRNCRG 
GRTHLCRNTI GVGVNREGAF AEYLVIPAFN AFKIPEGISD DLASIFDPFG NAVHTALSFD 
LVGEDVLITG AGPIGIMAAA VAKHVGARHV VITDVNEYRL ELARKMGVTR AVNVAEEKLE 
DVMSELGMTE GFDVGLEMSG NPAAFNSMLT TMNHGGRIAL LGIPPSDMGI DWNQVIFKGL 
VIKGIYGREM FETWYKMASL IQSGLDLSPI ITHHYKIDDF QEGFDVMRSG MSGKVILDWE