Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_04978 |
Symbol | |
ID | 5558852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 233758 |
End bp | 235962 |
Gene Length | 2205 bp |
Protein Length | 734 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640909457 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_001447113 |
Protein GI | 156976207 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAATG CTGCATCGGA TCGCCGTATT AAAGTTAAAG CGATGCTGTT TCTGACGCTT GGTGTCACCT TCTCTGTGTT TGCCGGATTT GCCCTTTCGC AGATGTTTGT CATAGAAAAA GATGCATTCC AGCTTATCTC GGTGGTGAGT TCGGTTATGG TGGTGAGTTT TTTGCGCTAT CAATGGCGAG CCTTGCCTGC AATTAACTTG AGCTTGTTCG CCTACTATGC CTTTACCGGT CGAAGCCCTG AGCATGCCTT GTTGTATTCG CTCACCGTTC CGATCTTACC TTTTGCGTTT TCAAGCCTAT TTCACTATCT AAACAATCGC TCGCTACATC AACCAGCCGC ACAGCGGATC AGCCTGTTTT TTGTCATTAT GGGCTGTTTA TTTCCTTTCG CGAATACCAT CAAAATCATG TTGGTGAATA CCTTCGTTGA TGGCCAGTTT TTAAGTCCTG ATTTTCTATT TTATGCCACG TTAGGCAATT ACTTAACTCA ACTGTTGGTA ACACCTATTT TATACGTGCT GGTGAGCCTG TTGACGGATA CCGATACCCA GTCTTACCTC GCTTTGGATA AACGTTTAAG AATCTCTAAT AGCCGCTGTC GAGGCTATTT AGCGTGGCTC GCGAGTTGCA TCGCGATTTT CATTGCTGCC GCGCTTTCTT CCACCTCTTT CATGCTCAAT TCGCTCAGCT TCTTCGCCGT TTTGCTTGTC GTCGTTGGCT TGGCAAAACA CGGCTTGATT CGGCCACTCT TTGTCGGCTC GCCATTTATC TTGTTGATAA TCAATGACGG TATCAGCCAC TACAACCAAG CATTAATTGG AGACAAACAG TTCTACGGCT TATTGATCAT CATTACTGTG CTTACCACCT TGGCGTATTT ACTGGGCGGC TACTCGGTAA AACTGTTTGA GATGACACAA AAGCAGATCC GCTCCGAGCG TATCGATCCA TACTCTGGAC TATCGAACAT TGCTCAGCTG AAAGAAGACA TCAGTCACCA ATCTCGTTCT TTGCTCATCT ACCTTGACTT AACACCCACA TTATCGATGT TGACCGATTT GGGCCATGAG GGAAAATCTC AGCTTATCAT GCAACTCAGT GAGTTTTTGT ACTCACGGAA CAACAGCATA AATCGTTGTT ATCGGCCACC TTTCTCAACG GGTCTACTGA GCTTTACCCA TTACTCAGAT ACCGCAGAAG AGGACCTTAA CGAGGTCGCG GACTACTTAG AAAGCTTCCA ATTTTATTGG CGAGGTACAT CGGTTGCACT AGTCTCCCCA ACCATTTTCT GCACGCTCGT CAGCCAAGAT CAGGACATTG AGAAAGTGGT GTCGATTCTG TGCGATCAAC CGCCTCAAAG TGATAGCAGT ATCCATTGGA TTAAGATCCA ATCTTTCGAA ATGGACCGCG TGGACAAACT GAACCACATT CAACAAGTGT TTAAGCGCGA ACAATTTGAG TTGTTCTGCC AACCATACAT GAAGCTTTCT GAATCTGAGC CGTCGAAACA CAGCTTTGAA GTACTCCTTC GCCTGAAAGA GCAAGATGGG CAAGTTCTAC CACCTTCGGC ATTTTTCCCA TTGATTAATC AATTTGGTTT AGAGCTCAAG CTCGATCACT GGGTCATTCT CAATACCTTC CGAATGCTGA GTGACAAGGT GAAGAATTGG AATAACATTG GTCACTGCGC CATCAACTTG ACCGCCAAAA CACTCAGTGC CGAGAACCTT GCAGTGCGCA TCATTGAAAG TGCGCAAAGC TTTTCGATTC CGCTGAACAA GATTTGCTTT GAGATCACCG AATCATCCGC ACTCATCAAT GAGCAACAAG CCATTGCAAA CTTGAGCCAC TTACGAGATC ACGGCTGTAA GATTGCGATA GACGACTTTG GAACAGGCTA CGCTAGCTTC GCGTACTTGC GCAGATTGCC ATTGGATATT CTTAAAATTG AAGGGGCGTT TGTTCGTGAG ATCACGCAGA GTGAGACGGA CCGTTTGATC GTCAGCTCCA TTGTAACGGT CGCAAAAGAA ATGCATTTAG AGACGGTGGC AGAATTTGTC GAGAGCACTA CACACATAGC GATATTAAGA AACTTGGGCA TCGACTTTGC GCAAGGTTAT GGCGTCGCGA AACCTATGCC TTTGAGCAAA TGTTTAGATG AGCTATTTGA AGTTGAACAC CTCAATCAGA GCTGA
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Protein sequence | MNNAASDRRI KVKAMLFLTL GVTFSVFAGF ALSQMFVIEK DAFQLISVVS SVMVVSFLRY QWRALPAINL SLFAYYAFTG RSPEHALLYS LTVPILPFAF SSLFHYLNNR SLHQPAAQRI SLFFVIMGCL FPFANTIKIM LVNTFVDGQF LSPDFLFYAT LGNYLTQLLV TPILYVLVSL LTDTDTQSYL ALDKRLRISN SRCRGYLAWL ASCIAIFIAA ALSSTSFMLN SLSFFAVLLV VVGLAKHGLI RPLFVGSPFI LLIINDGISH YNQALIGDKQ FYGLLIIITV LTTLAYLLGG YSVKLFEMTQ KQIRSERIDP YSGLSNIAQL KEDISHQSRS LLIYLDLTPT LSMLTDLGHE GKSQLIMQLS EFLYSRNNSI NRCYRPPFST GLLSFTHYSD TAEEDLNEVA DYLESFQFYW RGTSVALVSP TIFCTLVSQD QDIEKVVSIL CDQPPQSDSS IHWIKIQSFE MDRVDKLNHI QQVFKREQFE LFCQPYMKLS ESEPSKHSFE VLLRLKEQDG QVLPPSAFFP LINQFGLELK LDHWVILNTF RMLSDKVKNW NNIGHCAINL TAKTLSAENL AVRIIESAQS FSIPLNKICF EITESSALIN EQQAIANLSH LRDHGCKIAI DDFGTGYASF AYLRRLPLDI LKIEGAFVRE ITQSETDRLI VSSIVTVAKE MHLETVAEFV ESTTHIAILR NLGIDFAQGY GVAKPMPLSK CLDELFEVEH LNQS
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