Gene VIBHAR_04892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04892 
Symbol 
ID5558308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp160341 
End bp161306 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content47% 
IMG OID640909371 
Producthypothetical protein 
Protein accessionYP_001447027 
Protein GI156976121 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TCGCTCTTGC AGTGGCTACC GTTCTAGCTG GTGGCGTAAT GTCGAATGTT 
GCTCTTGCTG ACACTTACAT CGGCGGTAAG CTAGGTTACA ACGCTCTTAA CGACGCATGT 
CACCTAGACG CGCCATGTGA TGACGATAGC TTTGCTGCTG GCATGCACAT CGGTTACAAC 
TTCAACGAAT ACGTAGCTGC TGAATACGGC GTAGATTACC TAGGTAACTT CACTGCTAAC 
TTCAACAAAG CTGGCCTAAA CACAGTTGAT GGTGACCTAT GGGCACTAAC TCTTGCTCCT 
AAGTTCAACC TACCACTAAA TGATTCTTGG AACCTATTCG CTAAAGTAGG TGCTGCATAC 
ATGATGGCTG GTGGCGAGAA AGATTTCGTA CCAACTGGCT CTCTAGGTGC TGAATACCAA 
ATCAACTACA ACTGGAGCCT ACGCGCTGAG TACCAACGTT ACCAAGACAT GTCTGATGAC 
ATCATCGACG ACATGGATGC TGACTTCTTC GGTATCGGCT TCAACTACAA GTTCGGTTCT 
GAGCCAGTAG TTCAAGAAGA AGTAGTTGAA ACTCGTCCAG CGACTCGCAT CGTTGACCAC 
GAGTACCCAG CTCAATCTAC AACAGTACAA TTCGGCCTAG AAAGCGCTGA ACTACAAGAC 
TCTTCTGCGT TCAACGGTAC TGTTGAGCTA ATGAACACTT ACCCACAAGC TCAAGTTGAA 
ATCAACGGCT ACAGTGACAC AACTGGTTCT GAAGCTTACA ACCAACAGCT AACAGAGAAG 
CGTGCACAAG CAGTTGCTGA GCACTTCCAA GCTGAAGGTA TCGCTGCAGA CCGTATGACT 
GTTAAAGGTA TGGGTGAAGC TAACCCAGTA GCTAGCAACG AAACTCGCGA AGGTCGTGAA 
GAGAACCGTC GTGTAGAAGT TGTTGTTCCA GCTTTCCAAT ACCAAACTGA AGAAGCTGCT 
CAATAA
 
Protein sequence
MKKIALAVAT VLAGGVMSNV ALADTYIGGK LGYNALNDAC HLDAPCDDDS FAAGMHIGYN 
FNEYVAAEYG VDYLGNFTAN FNKAGLNTVD GDLWALTLAP KFNLPLNDSW NLFAKVGAAY 
MMAGGEKDFV PTGSLGAEYQ INYNWSLRAE YQRYQDMSDD IIDDMDADFF GIGFNYKFGS 
EPVVQEEVVE TRPATRIVDH EYPAQSTTVQ FGLESAELQD SSAFNGTVEL MNTYPQAQVE 
INGYSDTTGS EAYNQQLTEK RAQAVAEHFQ AEGIAADRMT VKGMGEANPV ASNETREGRE 
ENRRVEVVVP AFQYQTEEAA Q