Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_04880 |
Symbol | |
ID | 5558094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 148382 |
End bp | 149488 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640909359 |
Product | ABC-type spermidine/putrescine transport system ATPase component |
Protein accession | YP_001447015 |
Protein GI | 156976109 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | [TIGR03265] putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAACTA ACCAACATTA CCTAAATATC GAAAATGTAG TGAAGCAATT CGGACAGTTC ACTGCATTAA AGAAAATCTC GCTAGCGATT GAAAAGGGCG AGTTTGTTTG TTTTCTTGGT CCTTCTGGCT GCGGTAAAAC CACTCTATTA CGTGCCATTG CAGGCTTAGA CTTGCCAACG TCTGGTGCGA TTTTTCAAAA CGGTCAAGAG ACCACATTCC TACCACCAGA GAAGCGCGAT TTTGGTATCG TATTCCAATC TTACGCGCTG TTTCCGAACC TAACTGTACA AGAGAATATT GCAGTGGGTT TGAAGAACCA AGGCATGTCT ACCAAAGAAG CGTTAGAGAA GGTGGATTAC TGGCTAGAAA CCATTGGTCT TCCAACCTCT GGCGAGAAAT TCCCTAACCA ACTTTCTGGT GGTCAACAAC AGCGTGTGGC ACTTGCTCGC GCATTAGCGT TGTCTCCGGG TCTCCTGCTA CTTGATGAGC CGCTATCGGC GCTGGATGCA AAAGTACGTG TTCACTTACG TGACGAAATT TGTAAGCTGC AACGCAAGCT GGGCATCACC ACCATCATGG TTACGCACGA TCAGGATGAA GCATTGTCGA TGGCGGATCG TATCGTGGTG ATGAACCATG GTGTGATTGA GCAAGTCGGC ACTCCTCAAG AGATCTACCA ACAACCAGCA ACGCGCTTTG TTGCTGAGTT TGTCGGCAGC ATGAACTTTA TTGAAACCTC AGTCGCAACC GACTCCCAAG TGCGCATTGC GGAAACCTTG ATGCCAGCGC CAAGCTTGAC CAATCGTAAG ATCCAACGTG GTGACCGCTT CGACCTTGCG GTGCGCCCTG AAAGCATCAA GTTCGTTGAA AACTACACCA ACTCTTTACC AGTGCGAGTT ACCGCAACCG AGTTTTTGGG GGCGTTTTTC CGTATTGATT GCGTATTGCA AAACGACAGC TCAACGAAAA CCATCGTCGT GGATGTGCCT GTGGAAACGG TTCAAAAGCT CAATATCAAG GCGGGCGATG TACGTTACAT CCAGTTTGCT GAAGAAGGGC TGCATGGTTA CGCCGTGCCC TCGGTTGATA AAGCGCTAGC GGCGTAG
|
Protein sequence | MSTNQHYLNI ENVVKQFGQF TALKKISLAI EKGEFVCFLG PSGCGKTTLL RAIAGLDLPT SGAIFQNGQE TTFLPPEKRD FGIVFQSYAL FPNLTVQENI AVGLKNQGMS TKEALEKVDY WLETIGLPTS GEKFPNQLSG GQQQRVALAR ALALSPGLLL LDEPLSALDA KVRVHLRDEI CKLQRKLGIT TIMVTHDQDE ALSMADRIVV MNHGVIEQVG TPQEIYQQPA TRFVAEFVGS MNFIETSVAT DSQVRIAETL MPAPSLTNRK IQRGDRFDLA VRPESIKFVE NYTNSLPVRV TATEFLGAFF RIDCVLQNDS STKTIVVDVP VETVQKLNIK AGDVRYIQFA EEGLHGYAVP SVDKALAA
|
| |