Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_04834 |
Symbol | potE |
ID | 5556592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 101064 |
End bp | 102374 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640909313 |
Product | putrescine transporter |
Protein accession | YP_001446970 |
Protein GI | 156976064 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACTG AAACCAAAAA AATGTCGGTG GTGCAGCTAA CCATTCTGAC ATTCATTAAC ATGGCTGGCT CGGGCATCAT TATGCTGCCA AGTAAGCTGG CGCAAGTGGG CACGATTTCG ATTCTATCTT GGCTGATTAC TGCGGCGGGT TCATTGGCTC TTGCCTATGT ATTTGCGAAG TGTGGTCGCT TTAGTAAACG TGATGGTGGT ATGAACGGCT ATGCGTCGTA CGCGTTTGGT AAATCGGGTG CGTTTATGGC GGGTTGGACC TACGGCTTGT CACTGTTGAT TGCCAACATC GCGATTGCGA TTACCTGTGT CGGTTATGGC TCGGCTTTCT TCGAAGTGAC TTTGTCGCCA GTCGAGACCT GTCTGTACAC CATCGCTATC CTTTGGATTT GTACCTTCGC TAACTTTGGT GGTGCGAAGA TCACCGGTCA AATCGGCTCG TTTACAGTCT GGGGTGTTAT CCTTCCTGTG TGTTCTTTGG GTATTGTTGG TTGGTTCTAC TTTAGCCCAA CCATGTACGT AGAAGCGTGG AACCCACACC ACCTGCCATT TGGTGAAGCA GTAAGTGCGT CAATCGCAAT GACACTTTGG GCGTTCCTAG GTCTTGAGTC TGCTTGTGCG AACTCAGAAG CAGTAGAAAA TCCAGAGAAG AACGTACCAA TCGCAGTATT GGGCGGTACG CTGATTGCAG CAGTGGTTTA CATTGTTTCA ACCAACATCT GCTCTGGTAT CGTAGCGAAC TCTGAACTTG CTGCTTCTAC AGCGCCATTC TCAACAGTAT GGACAGTGAT GCTAGGTTCT ACGGCGGGTA AAGTGGTTGC GGGCATGGCG GTTCTTGCTT GTGCAGGTTC ACTACTGGGT TGGCAGTTCA CTATCGCGTC CGTATTCAAA TCATCTTCAG ACGCAGGCTT CTTCCCGAAA CTGTTCTCAC AAGTTGATAA ACGCGGTACA CCAATCAAAG GCATGGTGGC AATTACGGTT ATCCAGTCGG TGCTTTCTTT GATGACTATA TCACCAACAT TGAACGAGCA ATTTGAAGCG CTAGTTAACC TAGCCGTGGT GACGAACGTT ATTCCTTACA TTCTATGTAT GGGCGCAATC TTCATCATGC AGCAAGTGGC GCATGTGCCT GAGCGCGAGA TGAAAACCAC GAATATCATT GCGCTAGTCG GTTCTCTCTA CAGCTTCTAC GCGTTGTACG GTTCTGGCTA CGAAGCCATG ATGTGGGGTT CTATCGTTAC CTTCCTAGGT TGGAGTGCTT ACGGTTTGAT CGCTGCGAAG CATGAACCAC TCGCGAACTA A
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Protein sequence | MSTETKKMSV VQLTILTFIN MAGSGIIMLP SKLAQVGTIS ILSWLITAAG SLALAYVFAK CGRFSKRDGG MNGYASYAFG KSGAFMAGWT YGLSLLIANI AIAITCVGYG SAFFEVTLSP VETCLYTIAI LWICTFANFG GAKITGQIGS FTVWGVILPV CSLGIVGWFY FSPTMYVEAW NPHHLPFGEA VSASIAMTLW AFLGLESACA NSEAVENPEK NVPIAVLGGT LIAAVVYIVS TNICSGIVAN SELAASTAPF STVWTVMLGS TAGKVVAGMA VLACAGSLLG WQFTIASVFK SSSDAGFFPK LFSQVDKRGT PIKGMVAITV IQSVLSLMTI SPTLNEQFEA LVNLAVVTNV IPYILCMGAI FIMQQVAHVP EREMKTTNII ALVGSLYSFY ALYGSGYEAM MWGSIVTFLG WSAYGLIAAK HEPLAN
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