Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_04781 |
Symbol | |
ID | 5556676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 43814 |
End bp | 45805 |
Gene Length | 1992 bp |
Protein Length | 663 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640909260 |
Product | peptidase |
Protein accession | YP_001446917 |
Protein GI | 156976011 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATACGCG ACCAATTTGA GTTATTAGCC CCGGGCGGCG ATCTGGATTC CATCAAAGCA GCCATTGCTG CAGGTGCCGA TGCCATTTAC TGCGGATTGG ACCGCTTTAA TGCCCGCAAC CGAGCCACCA ACCTCACCTT AGATAACTTG AATGGCGTGT TACTGCTTGC TCATCAGCAC AACTGTAAGA TCTTCTTGAC TCTTAACGTG TTGATTCTGG AGAGCGAAAT TCCCGCCATC GTGCGCTTGC TCAGCCAGTT AAACACCACC GCAATTGATG GCGTGATCGT GCAAGATCTT GGTTTGGCTT ACATTCTCAA GAATCATTTC CCAGATCTAG ACGTACACGC CTCCACTCAA CTCAACACGC ACAACGAAGG ACAGATCTTG TTCCTGAATC AGTTGACGGC AAGCCGCGTA AACCTCTCTC GTGAACTGAA CATCAATGAG ATCAAGCATC TGGCTCAGTT TGGTCGTGAG CATGACGTGA TGATGGAAGT GTTTGTGCAT GGCTCTTACT GCATTGGTTT CTCTGGCATC TGTTACATCA GTTCTGCGCG CAACGGTGCT TCGGGCAACC GTGGTCGTTG TAGCCAGCCT TGTCGTGAGC AATACGAAAC CACCAAAACA GGCAACAGCT ACCCTCTCAA CATGAAGGAC AACTCAGCAT TTGGCGATTT AGAAGCGCTT GCCGATGCGG GTGTGTATTC GTTGAAAGTG GAAGGCCGCA TTAAGAAATC CCACTACGTT TATACCGTGG TCGATAACTG GCGTAAACAG ATTGACCGCT TATGTGATGG CGTAGAACTG TCGAACGACA CCACTGAGTT GTACACGGTA TTTAACCGTG ATTTCTCTAA CGCGTTTTTA CAAGGCGATT TCGGTAAAGC GATGTACATC GACAACCCTC GCGATCACGC CGTAAAATAC TTCTCGAAGA TCTACAAATG CGAATCCGCC GATGATTTAC AAGGCGTGAA GAAGAAGCTC TACGACGACA AAACCGCAAT CATTGAGAAG GTTGCAGAGA AGACTCAAGA TTTTGATGTA ACTACAACTC AAACCTCTGG CAGCAGCCTA AAAGGCGCGA TTGATGTACC GACTTTGCCG ACGCTACCTC AGCCAGATAT GCGCAAAGGC GCTCCGAAGC TATCTGTCTT AATTTCATCA ATAGAAGACA CCGCACTATG CGAAGACAGC AATGTCGATG TGTATTTCCA GCTACCAATG GGGTTGGCGG GTGAACTGAA TGCGATGATT GAGTTGTTCC AAGCAAACCA AAGATTGAAA CCTTGGTTCC CTGCAATTTT GATTGGTGAC GATTACCAAG CCGCACGTAC ATTCTTAAAA ACAGTAAAGC CAGAATTGTC GATCACCAAT AATTCTGGTG TGGGTATTTT GGCTCAAGCG CAAGGGTTAG GTTGGATTGC GGGCCCGCAG ATGAACACAA TGAACTCGTA CTCGTTCAAA TGTTTGCAAG ATGAGTTCGC TGCAAGCGGT GCGTTTATCT CTAACGAGCT GAACATGAAG CAGATGCGCC ACATTAAGCG CCCGCACAAC ATGCGCAGCT ACTACAGCAT TTATCATCCG AACACTCTGC TGACCAGTCG ACAGTGTTTG TTCCAACAAA CCGAAGGTTG CCGCAAAATT AAGGTTAACA AAGGCTGTTT GAAGCGTTGT GACAAGCGCA CATCGATCAT CAACCTAAAA GACAACCCAT ATGTGGTACA AAAACAAAAA GGCAGTCACA ACTCGATCTA CAGCGAGCAC AACGTACTGA ACCTGCAAGT ACTGCAGGAT TTGCCGCAGC TGTTAACTGA CGTGTTGATC GACCTACGCG ACATCCAGAC AGAAACTAAA GTCACGATGG CCAAACCTGA ATTGATCGAT GCCTTTACCG CTCTGCTGAA TGAACATAAT GAGCAGCATG TTGAAGCACT TAATACTGCG ATTCACCCGA CGGCAAACGC TCAATACTTG AAAGGCTTGT AA
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Protein sequence | MIRDQFELLA PGGDLDSIKA AIAAGADAIY CGLDRFNARN RATNLTLDNL NGVLLLAHQH NCKIFLTLNV LILESEIPAI VRLLSQLNTT AIDGVIVQDL GLAYILKNHF PDLDVHASTQ LNTHNEGQIL FLNQLTASRV NLSRELNINE IKHLAQFGRE HDVMMEVFVH GSYCIGFSGI CYISSARNGA SGNRGRCSQP CREQYETTKT GNSYPLNMKD NSAFGDLEAL ADAGVYSLKV EGRIKKSHYV YTVVDNWRKQ IDRLCDGVEL SNDTTELYTV FNRDFSNAFL QGDFGKAMYI DNPRDHAVKY FSKIYKCESA DDLQGVKKKL YDDKTAIIEK VAEKTQDFDV TTTQTSGSSL KGAIDVPTLP TLPQPDMRKG APKLSVLISS IEDTALCEDS NVDVYFQLPM GLAGELNAMI ELFQANQRLK PWFPAILIGD DYQAARTFLK TVKPELSITN NSGVGILAQA QGLGWIAGPQ MNTMNSYSFK CLQDEFAASG AFISNELNMK QMRHIKRPHN MRSYYSIYHP NTLLTSRQCL FQQTEGCRKI KVNKGCLKRC DKRTSIINLK DNPYVVQKQK GSHNSIYSEH NVLNLQVLQD LPQLLTDVLI DLRDIQTETK VTMAKPELID AFTALLNEHN EQHVEALNTA IHPTANAQYL KGL
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